GitHub Issue NOAA-EMC#266: remove DOGCYCLE and DOGAUSFCANL scripting …

…and variables from j-jobs and scripts * jobs/JGDAS_ATMOS_ANALYSIS_DIAG - remove DOGCYCLE and DOGAUSFCANL * jobs/JGLOBAL_ATMOS_ANALYSIS - remove DOGCYCLE and DOGAUSFCANL * jobs/JGLOBAL_ATMOS_ANALYSIS_CALC - remove DOGCYCLE and DOGAUSFCANL * scripts/exglobal_atmos_analysis.sh - remove DOGCYCLE scripting and DOGAUSFCANL variables * scripts/exglobal_atmos_analysis_calc.sh - remove DOGAUSFCANL scripting
RussTreadon-NOAA · Dec 13, 2021 · 9422758 · 9422758
1 parent eed3d40
commit 9422758
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Showing 5 changed files with 2 additions and 139 deletions.
diff --git a/jobs/JGDAS_ATMOS_ANALYSIS_DIAG b/jobs/JGDAS_ATMOS_ANALYSIS_DIAG
@@ -113,15 +113,6 @@ if [ $DOHYBVAR = "YES" ]; then
 fi
 
 
-
-# Update surface fields with global_cycle
-export DOGCYCLE=${DOGCYCLE:-"YES"}
-
-
-# Generate Gaussian surface analysis
-export DOGAUSFCANL=${DOGAUSFCANL:-"YES"}
-
-
 ###############################################################
 # Run relevant script
 env

diff --git a/jobs/JGLOBAL_ATMOS_ANALYSIS b/jobs/JGLOBAL_ATMOS_ANALYSIS
@@ -136,14 +136,6 @@ export TCVITL="${COMOUT}/${OPREFIX}syndata.tcvitals.tm00"
 [[ $DONST = "YES" ]] && export NSSTBF="${COMOUT}/${OPREFIX}nsstbufr"
 
 
-# Update surface fields with global_cycle
-export DOGCYCLE=${DOGCYCLE:-"YES"}
-
-
-# Generate Gaussian surface analysis
-export DOGAUSFCANL=${DOGAUSFCANL:-"YES"}
-
-
 ###############################################################
 # Run relevant script
 env

diff --git a/jobs/JGLOBAL_ATMOS_ANALYSIS_CALC b/jobs/JGLOBAL_ATMOS_ANALYSIS_CALC
@@ -124,15 +124,6 @@ if [ $DOHYBVAR = "YES" ]; then
 fi
 
 
-
-# Update surface fields with global_cycle
-export DOGCYCLE=${DOGCYCLE:-"YES"}
-
-
-# Generate Gaussian surface analysis
-export DOGAUSFCANL=${DOGAUSFCANL:-"YES"}
-
-
 ###############################################################
 # Run relevant script
 env

diff --git a/scripts/exglobal_atmos_analysis.sh b/scripts/exglobal_atmos_analysis.sh
@@ -53,29 +53,6 @@ APRUNCFP=${APRUNCFP:-""}
 APRUN_GSI=${APRUN_GSI:-${APRUN:-""}}
 NTHREADS_GSI=${NTHREADS_GSI:-${NTHREADS:-1}}
 
-# Surface cycle related parameters
-DOGCYCLE=${DOGCYCLE:-"NO"}
-CYCLESH=${CYCLESH:-$HOMEgfs/ush/global_cycle.sh}
-export CYCLEXEC=${CYCLEXEC:-$HOMEgfs/exec/global_cycle}
-NTHREADS_CYCLE=${NTHREADS_CYCLE:-24}
-APRUN_CYCLE=${APRUN_CYCLE:-${APRUN:-""}}
-export SNOW_NUDGE_COEFF=${SNOW_NUDGE_COEFF:-'-2.'}
-export CYCLVARS=${CYCLVARS:-""}
-export FHOUR=${FHOUR:-0}
-export DELTSFC=${DELTSFC:-6}
-export FIXgsm=${FIXgsm:-$HOMEgfs/fix/fix_am}
-export FIXfv3=${FIXfv3:-$HOMEgfs/fix/fix_fv3_gmted2010}
-
-DOGAUSFCANL=${DOGAUSFCANL-"NO"}
-GAUSFCANLSH=${GAUSFCANLSH:-$HOMEgfs/ush/gaussian_sfcanl.sh}
-export GAUSFCANLEXE=${GAUSFCANLEXE:-$HOMEgfs/exec/gaussian_sfcanl.exe}
-NTHREADS_GAUSFCANL=${NTHREADS_GAUSFCANL:-1}
-APRUN_GAUSFCANL=${APRUN_GAUSFCANL:-${APRUN:-""}}
-
-# FV3 specific info (required for global_cycle)
-export CASE=${CASE:-"C384"}
-ntiles=${ntiles:-6}
-
 # Microphysics in the model; 99:ZC, 11:GFDLMP
 export imp_physics=${imp_physics:-99}
 lupp=${lupp:-".true."}
@@ -630,7 +607,6 @@ fi
 
 ##############################################################
 # Output files
-# $SFCANL is no longer created here since global_cycle is not called
 $NLN $ATMANL siganl
 $NLN $ATMINC siginc.nc
 if [ $DOHYBVAR = "YES" -a $l4densvar = ".true." -a $lwrite4danl = ".true." ]; then
@@ -969,77 +945,6 @@ if [ $DO_CALC_INCREMENT = "YES" ]; then
   export err=$?; err_chk
 fi
 
-##############################################################
-# Update surface fields in the FV3 restart's using global_cycle
-if [ $DOGCYCLE = "YES" ]; then
-
-    mkdir -p $COMOUT/RESTART
-
-    # Global cycle requires these files
-    export FNTSFA=${FNTSFA:-$COMIN_OBS/${OPREFIX}rtgssthr.grb}
-    export FNACNA=${FNACNA:-$COMIN_OBS/${OPREFIX}seaice.5min.blend.grb}
-    export FNSNOA=${FNSNOA:-$COMIN_OBS/${OPREFIX}snogrb_t${JCAP_CASE}.${LONB_CASE}.${LATB_CASE}}
-    [[ ! -f $FNSNOA ]] && export FNSNOA="$COMIN_OBS/${OPREFIX}snogrb_t1534.3072.1536"
-    FNSNOG=${FNSNOG:-$COMIN_GES_OBS/${GPREFIX}snogrb_t${JCAP_CASE}.${LONB_CASE}.${LATB_CASE}}
-    [[ ! -f $FNSNOG ]] && FNSNOG="$COMIN_GES_OBS/${GPREFIX}snogrb_t1534.3072.1536"
-
-    # Set CYCLVARS by checking grib date of current snogrb vs that of prev cycle
-    if [ $RUN_GETGES = "YES" ]; then
-        snoprv=$($GETGESSH -q -t snogrb_$JCAP_CASE -e $gesenvir -n $GDUMP -v $GDATE)
-    else
-        snoprv=${snoprv:-$FNSNOG}
-    fi
-
-    if [ $($WGRIB -4yr $FNSNOA 2>/dev/null | grep -i snowc | awk -F: '{print $3}' | awk -F= '{print $2}') -le \
-         $($WGRIB -4yr $snoprv 2>/dev/null | grep -i snowc | awk -F: '{print $3}' | awk -F= '{print $2}') ] ; then
-        export FNSNOA=" "
-        export CYCLVARS="FSNOL=99999.,FSNOS=99999.,"
-    else
-        export SNOW_NUDGE_COEFF=${SNOW_NUDGE_COEFF:-0.}
-        export CYCLVARS="FSNOL=${SNOW_NUDGE_COEFF},$CYCLVARS"
-    fi
-
-    if [ $DONST = "YES" ]; then
-        export NST_ANL=".true."
-        export GSI_FILE=${GSI_FILE:-$COMOUT/${APREFIX}dtfanl.nc}
-    else
-        export NST_ANL=".false."
-        export GSI_FILE="NULL"
-    fi
-
-    if [ $DOIAU = "YES" ]; then
-        # update surface restarts at the beginning of the window, if IAU
-        # For now assume/hold dtfanl.nc valid at beginning of window
-        for n in $(seq 1 $ntiles); do
-            $NLN $COMIN_GES/RESTART/$bPDY.${bcyc}0000.sfc_data.tile${n}.nc $DATA/fnbgsi.00$n
-            $NLN $COMOUT/RESTART/$bPDY.${bcyc}0000.sfcanl_data.tile${n}.nc $DATA/fnbgso.00$n
-            $NLN $FIXfv3/$CASE/${CASE}_grid.tile${n}.nc                    $DATA/fngrid.00$n
-            $NLN $FIXfv3/$CASE/${CASE}_oro_data.tile${n}.nc                $DATA/fnorog.00$n
-        done
-
-        export APRUNCY=$APRUN_CYCLE
-        export OMP_NUM_THREADS_CY=$NTHREADS_CYCLE
-        export MAX_TASKS_CY=$ntiles
-
-        $CYCLESH
-        export err=$?; err_chk
-    fi
-    # update surface restarts at middle of window
-    for n in $(seq 1 $ntiles); do
-        $NLN $COMIN_GES/RESTART/$PDY.${cyc}0000.sfc_data.tile${n}.nc $DATA/fnbgsi.00$n
-        $NLN $COMOUT/RESTART/$PDY.${cyc}0000.sfcanl_data.tile${n}.nc $DATA/fnbgso.00$n
-        $NLN $FIXfv3/$CASE/${CASE}_grid.tile${n}.nc                  $DATA/fngrid.00$n
-        $NLN $FIXfv3/$CASE/${CASE}_oro_data.tile${n}.nc              $DATA/fnorog.00$n
-    done
-
-    export APRUNCY=$APRUN_CYCLE
-    export OMP_NUM_THREADS_CY=$NTHREADS_CYCLE
-    export MAX_TASKS_CY=$ntiles
-
-    $CYCLESH
-    export err=$?; err_chk
-fi
-
 
 ##############################################################
 # For eupd
@@ -1086,7 +991,7 @@ cd $pwd
 if [ $SENDECF = "YES" -a "$RUN" != "enkf" ]; then
    ecflow_client --event release_fcst
 fi
-echo "$CDUMP $CDATE atminc and tiled sfcanl done at `date`" > $COMOUT/${APREFIX}loginc.txt
+echo "$CDUMP $CDATE atminc done at `date`" > $COMOUT/${APREFIX}loginc.txt
 
 ################################################################################
 set +x

diff --git a/scripts/exglobal_atmos_analysis_calc.sh b/scripts/exglobal_atmos_analysis_calc.sh
@@ -73,12 +73,6 @@ export NTHREADS_CHGRES=${NTHREADS_CHGRES:-1}
 CALCINCPY=${CALCINCPY:-$HOMEgfs/ush/calcinc_gfs.py}
 CALCANLPY=${CALCANLPY:-$HOMEgfs/ush/calcanl_gfs.py}
 
-DOGAUSFCANL=${DOGAUSFCANL-"NO"}
-GAUSFCANLSH=${GAUSFCANLSH:-$HOMEgfs/ush/gaussian_sfcanl.sh}
-export GAUSFCANLEXE=${GAUSFCANLEXE:-$HOMEgfs/exec/gaussian_sfcanl.exe}
-NTHREADS_GAUSFCANL=${NTHREADS_GAUSFCANL:-1}
-APRUN_GAUSFCANL=${APRUN_GAUSFCANL:-${APRUN:-""}}
-
 # OPS flags
 RUN=${RUN:-""}
 SENDECF=${SENDECF:-"NO"}
@@ -190,17 +184,7 @@ else
    echo "Neither increment nor analysis are generated by external utils"
 fi
 
-##############################################################
-# Create gaussian grid surface analysis file at middle of window
-if [ $DOGAUSFCANL = "YES" ]; then
-    export APRUNSFC=$APRUN_GAUSFCANL
-    export OMP_NUM_THREADS_SFC=$NTHREADS_GAUSFCANL
-
-    $GAUSFCANLSH
-    export err=$?; err_chk
-fi
-
-echo "$CDUMP $CDATE atmanl and sfcanl done at `date`" > $COMOUT/${APREFIX}loganl.txt
+echo "$CDUMP $CDATE atmanl done at `date`" > $COMOUT/${APREFIX}loganl.txt
 
 ################################################################################
 # Postprocessing