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added FSL interactivity note #576

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Sep 11, 2023
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added FSL interactivity note #576

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3376e04
added FSL interactivity note
stebo85 Sep 5, 2023
18a7716
Update installation.rst
stebo85 Sep 11, 2023
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8 changes: 8 additions & 0 deletions docs/user_guide/installation.rst
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Expand Up @@ -11,6 +11,14 @@ Docker or Singularity.

docker run --rm repronim/neurodocker:latest --help

Note: Some tools require an interactive input during installation (e.g. FSL). This can either be handled using the Neurodocker `--yes` option (see examples -> FSL) or running the container interactively will also allow to answer this question:

.. code-block:: bash

docker run -i --rm

Alternatively, a singularity container:

.. code-block:: bash

singularity run docker://repronim/neurodocker:latest --help
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