Fixed minor errors in data files and fixed typo in README

RMBarnard · Nov 7, 2022 · 82688c0 · 82688c0
1 parent 51c30aa
commit 82688c0
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Showing 3 changed files with 1 addition and 6 deletions.
diff --git a/README.md b/README.md
@@ -179,7 +179,7 @@ Rows can be pruned allele by allele using probabilities given in the legend file
 
 ```
 $ python sim.py
-    -i testData/ProbExample.haps.sm \
+    -m testData/ProbExample.haps.sm \
     -H new.hap.gz \
     -l testData/ProbExample.probs.legend \
     -prob

diff --git a/lib/raresim/test/data/Simulated_80k.legend b/lib/raresim/test/data/Simulated_80k.legend
@@ -247,5 +247,3 @@ id	position	a0	a1
 19:54313615_Un_Known	54313615	A	T
 19:54313616_Un_Known	54313616	A	T
 19:54313617_Un_Known	54313617	A	T
-19:54313618_Un_Known	54313618	A	T
-19:54313619_Un_Known	54313619	A	T
diff --git a/lib/raresim/test/data/chr19.block37.NFE.sim100.stratified.legend b/lib/raresim/test/data/chr19.block37.NFE.sim100.stratified.legend
@@ -19025,6 +19025,3 @@ id	position	a0	a1	fun
 19:14887563_T_C	14887563	T	C	syn
 19:14887564_C_T	14887564	C	T	fun
 19:14887565_C_G	14887565	C	G	fun
-19:14887566_C_A	14887566	C	A	fun
-19:14887567_A_G	14887567	A	G	fun
-19:14887568_T_A	14887568	T	A	fun