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Fix incorrectly size compute in auto3dseg analyzer #7374

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merged 2 commits into from
Jan 9, 2024

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KumoLiu
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@KumoLiu KumoLiu commented Jan 8, 2024

Fixes #7222

Description

remove int convert here.

int(a * b) for a, b in zip(report[ImageStatsKeys.SHAPE][0], report[ImageStatsKeys.SPACING])

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Breaking change (fix or new feature that would cause existing functionality to change).
  • New tests added to cover the changes.
  • Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
  • Quick tests passed locally by running ./runtests.sh --quick --unittests --disttests.
  • In-line docstrings updated.
  • Documentation updated, tested make html command in the docs/ folder.

Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
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KumoLiu commented Jan 8, 2024

/build

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good

@KumoLiu KumoLiu merged commit d7137cf into Project-MONAI:dev Jan 9, 2024
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@KumoLiu KumoLiu deleted the dataanalyze branch January 9, 2024 03:13
marksgraham pushed a commit to marksgraham/MONAI that referenced this pull request Jan 30, 2024
Fixes Project-MONAI#7222

### Description
remove int convert here.

https://github.com/Project-MONAI/MONAI/blob/8fa6931b14ba9617a595fff1d396ac44cc82e207/monai/auto3dseg/analyzer.py#L259

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/`
folder.

---------

Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
Signed-off-by: Mark Graham <markgraham539@gmail.com>
juampatronics pushed a commit to juampatronics/MONAI that referenced this pull request Mar 25, 2024
Fixes Project-MONAI#7222

### Description
remove int convert here.

https://github.com/Project-MONAI/MONAI/blob/8fa6931b14ba9617a595fff1d396ac44cc82e207/monai/auto3dseg/analyzer.py#L259

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/`
folder.

---------

Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
Signed-off-by: Juan Pablo de la Cruz Gutiérrez <juampatronics@gmail.com>
Yu0610 pushed a commit to Yu0610/MONAI that referenced this pull request Apr 11, 2024
Fixes Project-MONAI#7222

### Description
remove int convert here.

https://github.com/Project-MONAI/MONAI/blob/8fa6931b14ba9617a595fff1d396ac44cc82e207/monai/auto3dseg/analyzer.py#L259

### Types of changes
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Non-breaking change (fix or new feature that would not break
existing functionality).
- [ ] Breaking change (fix or new feature that would cause existing
functionality to change).
- [ ] New tests added to cover the changes.
- [ ] Integration tests passed locally by running `./runtests.sh -f -u
--net --coverage`.
- [ ] Quick tests passed locally by running `./runtests.sh --quick
--unittests --disttests`.
- [ ] In-line docstrings updated.
- [ ] Documentation updated, tested `make html` command in the `docs/`
folder.

---------

Signed-off-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>
Signed-off-by: Yu0610 <612410030@alum.ccu.edu.tw>
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auto3dseg analyzer incorrectly computes size of images, rounds to integers
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