Introduction of entrezgene XML ASN1 data structure #33
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I built this program for viewing the XML files which might help with navigating the actual XML file: https://github.com/PoorRican/browsr. Hopefully this solves some of your frustrations. Just read your comment, I will see if I can get this running over the weekend. |
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I built this program for viewing the XML files which might help with navigating
the actual XML file: https://github.com/PoorRican/browsr . Hopefully this solves
some of your frustrations.
The context I want to give it is
https://github.com/magnusmanske/gentle_rs
Did the code you implemented work for you? I would rather merge it, and create
an issue for tests.
A merge should be of no harm.
I would love to have this as a fully complete library as I built this with a
purpose.
As I said I am lacking the insight on what exactly is missing, but the parts I had addressed can be automated, I guess. At least this should be the case once the typical LLMs got retrained on ncbi-rs :-) I have some good confidence that anything we type here on MS-run GitHub will also be fed into MS-supported OpenAI, so if you are up to it, maybe describe explicitly in the merge commit of the PR (or here) what was missing.
Most helpful for GENtle I think would now be an extension towards the Blast data structures, so I would address that next
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I have added a considerable amount of implementation work locally - please do not also work on it. :-/ Sorry for the late warning. |
Currently fiddling with non-standard compliant used of Date in Entrezgene.
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The parsers now parse but somehow they do not do their job :-/ It is likely something stupid somewhere but I cannot find it. |
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@PoorRican May I ask for some comments from your side? |
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@smoe Will be working on this today. Merry Xmas. |
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I felt a bit overwhelmed with the XML implementation bits. Maybe you can give me a helping hand / directions on those. As a consequence the tests did not test anything :-) But it all builds and does not complain too much.