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Update biobb fork (#253)
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sameeul authored Jul 17, 2024
1 parent c57019c commit 51d50e2
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Showing 7 changed files with 8 additions and 8 deletions.
2 changes: 1 addition & 1 deletion .github/workflows/fuzzy_compile_weekly.yml
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,7 @@ jobs:
if: always()
uses: actions/checkout@v3
with:
repository: sameeul/biobb_adapters
repository: vjaganat90/biobb_adapters
ref: master
path: biobb_adapters

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4 changes: 2 additions & 2 deletions .github/workflows/lint_and_test.yml
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Expand Up @@ -103,8 +103,8 @@ jobs:
uses: actions/checkout@v3
with:
# NOTE: temporarily hardcode sameeul & master because we can only
# have up to 10 input parameters for workflow_dispatch...
repository: sameeul/biobb_adapters
# have up to 10 input parameters for workflow_dispatch
repository: vjaganat90/biobb_adapters
ref: master
path: biobb_adapters

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2 changes: 1 addition & 1 deletion .github/workflows/lint_and_test_macos.yml
Original file line number Diff line number Diff line change
Expand Up @@ -47,7 +47,7 @@ jobs:
if: always()
uses: actions/checkout@v3
with:
repository: sameeul/biobb_adapters
repository: vjaganat90/biobb_adapters
ref: master
path: biobb_adapters

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2 changes: 1 addition & 1 deletion .github/workflows/run_workflows.yml
Original file line number Diff line number Diff line change
Expand Up @@ -81,7 +81,7 @@ jobs:
with:
# NOTE: temporarily hardcode sameeul & master because we can only
# have up to 10 input parameters for workflow_dispatch...
repository: sameeul/biobb_adapters
repository: vjaganat90/biobb_adapters
ref: master
path: biobb_adapters

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2 changes: 1 addition & 1 deletion .github/workflows/run_workflows_weekly.yml
Original file line number Diff line number Diff line change
Expand Up @@ -45,7 +45,7 @@ jobs:
if: always()
uses: actions/checkout@v3
with:
repository: sameeul/biobb_adapters
repository: vjaganat90/biobb_adapters
ref: master
path: biobb_adapters

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2 changes: 1 addition & 1 deletion install/install_biobb_adapters.sh
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Expand Up @@ -9,5 +9,5 @@ then
else
# NOTE: Do not use https://github.com/bioexcel/biobb_adapters
# Our fork has a few changes from the upstream repo
git clone https://github.com/jfennick/biobb_adapters.git
git clone https://github.com/vjaganat90/biobb_adapters.git
fi
2 changes: 1 addition & 1 deletion install/install_timeseriesplots.sh
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Expand Up @@ -7,7 +7,7 @@ then
echo "Please install timeseriesplots manually."
exit 1
else
git clone https://github.com/jfennick/timeseriesplots.git
git clone https://github.com/sameeul/timeseriesplots.git
cd timeseriesplots
cd install
./install_system_deps.sh
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