test pip install setup.py

setup.py

@@ -0,0 +1,50 @@
+import json
+from pathlib import Path
+from shutil import copytree, ignore_patterns
+from setuptools import setup, find_packages
+from setuptools.command.install import install
+import versioneer
+# from sophios import _version, cli, input_output as io
+
+
+class PostInstallCommand(install):
+    """Post-installation for installation mode."""
+
+    def run(self) -> None:
+        install.run(self)
+        # Custom post-installation actions go here
+        # Never overwrite user config
+        if not (Path.home() / 'wic').exists():
+            # config_path
+            config_path = Path.home() / 'wic'
+            cwl_path = config_path / 'cwl_adapters'
+            wic_path = config_path / 'examples'
+            global_config_file = config_path / 'global_config.json'
+            extlist = ['*.png', '*.md', '*.rst', '*.pyc', '__pycache__', '*.json']
+            adapters_dir = Path(__file__).parent / 'cwl_adapters'
+            examples_dir = Path(__file__).parent / 'docs' / 'tutorials'
+            config_file = Path(__file__).parent / 'src' / 'sophios' / 'config_basic.json'
+            config = {}
+            # config_file can contain absolute or relative paths
+            with open(config_file, 'r', encoding='utf-8') as f:
+                config = json.load(f)
+            conf_tags = ['search_paths_cwl', 'search_paths_wic']
+            for tag in conf_tags:
+                for ns in config[tag]:
+                    abs_paths = [str(Path.home() / path) for path in config[tag][ns]]
+                    config[tag][ns] = abs_paths
+            # copy to config_path
+            copytree(adapters_dir, cwl_path)
+            copytree(examples_dir, wic_path, ignore=ignore_patterns(*extlist))
+            with open(global_config_file, 'w', encoding='utf-8') as f:
+                json.dump(config, f)
+
+
+setup(
+    name='sophios',
+    version=versioneer.get_version(),
+    packages=find_packages(),
+    cmdclass={
+        'install': PostInstallCommand,
+    },
+)