pin imagecodecs

PolusAI · Dec 31, 2024 · eec59ac · eec59ac
1 parent e47e56e
commit eec59ac
Show file tree

Hide file tree

Showing 6 changed files with 8 additions and 8 deletions.
diff --git a/.github/workflows/build_cuda11_wheels.yml b/.github/workflows/build_cuda11_wheels.yml
@@ -74,7 +74,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_LINUX: "auditwheel repair --exclude=libcufft.so --exclude=libcufft.so.10 --exclude=libcufft.so.10.4.2.109 --exclude=libcudart.so --exclude=libcudart.so.11.0 --exclude=libcudart.so.11.3.109  -w {dest_dir} {wheel}"
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -vv -w {dest_dir} {wheel} --no-dll=cufft64_10.dll;cufftw64_10.dll;cudart32_110.dll;cudart64_110.dll"
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_BEFORE_TEST_WINDOWS: xcopy /E /I /y "C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v11.8\bin" %SystemRoot%\System32
           CIBW_TEST_COMMAND: python -m pip check
 

diff --git a/.github/workflows/build_cuda12_wheels.yml b/.github/workflows/build_cuda12_wheels.yml
@@ -74,7 +74,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -w {dest_dir} {wheel} --no-dll cufft64_11.dll;cufftw64_11.dll;cudart32_120.dll;cudart64_120.dll"
           CIBW_REPAIR_WHEEL_COMMAND_LINUX: auditwheel repair --exclude=libcufft.so --exclude=libcufft.so.11 --exclude=libcufft.so.11.0.12.1  --exclude=libcudart.so --exclude=libcudart.so.12 --exclude=libcudart.so.12.3.101  -w {dest_dir} {wheel}
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_BEFORE_TEST_WINDOWS: xcopy /E /I /y "C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v12.0\bin" %SystemRoot%\System32
           CIBW_TEST_COMMAND: python -m pip check
 

diff --git a/.github/workflows/build_wheels.yml b/.github/workflows/build_wheels.yml
@@ -63,7 +63,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_MACOS: DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-listdeps {wheel} && DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-wheel --require-archs {delocate_archs} -w {dest_dir} {wheel}
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -w {dest_dir} {wheel}"
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_TEST_COMMAND: pytest -vv {project}/tests/python
 
       - name: Upload Artifact
@@ -114,7 +114,7 @@ jobs:
           CIBW_ENVIRONMENT_MACOS: REPAIR_LIBRARY_PATH="/tmp/nyxus_bld/local_install/lib:/tmp/nyxus_bld/local_install/lib64" PATH="/opt/homebrew/opt/llvm@16/bin:$PATH" COMPILER="/opt/homebrew/opt/llvm@16/bin/clang++" CFLAGS="-I/opt/homebrew/opt/llvm@16/include" CPPFLAGS="-I/opt/homebrew/opt/llvm@16/include" LDFLAGS="-L/opt/homebrew/opt/llvm@16/lib -L/opt/homebrew/opt/llvm@16/lib/c++ -Wl,-rpath,/opt/homebrew/opt/llvm@16/lib/c++" CXX="/opt/homebrew/opt/llvm@16/bin/clang++" CC="/opt/homebrew/opt/llvm@16/bin/clang" NYXUS_DEP_DIR="/tmp/nyxus_bld/local_install"
           CIBW_REPAIR_WHEEL_COMMAND_MACOS: DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-listdeps {wheel} && DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-wheel --require-archs {delocate_archs} -w {dest_dir} {wheel}
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_TEST_COMMAND: pytest -vv {project}/tests/python
 
       - name: Upload Artifact

diff --git a/.github/workflows/publish_cuda11_pypi.yml b/.github/workflows/publish_cuda11_pypi.yml
@@ -76,7 +76,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_LINUX: "auditwheel repair --exclude=libcufft.so --exclude=libcufft.so.10 --exclude=libcufft.so.10.4.2.109 --exclude=libcudart.so --exclude=libcudart.so.11.0 --exclude=libcudart.so.11.3.109  -w {dest_dir} {wheel}"
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -vv -w {dest_dir} {wheel} --no-dll=cufft64_10.dll;cufftw64_10.dll;cudart32_110.dll;cudart64_110.dll"
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_BEFORE_TEST_WINDOWS: xcopy /E /I /y "C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v11.8\bin" %SystemRoot%\System32
           CIBW_TEST_COMMAND: python -m pip check
 

diff --git a/.github/workflows/publish_cuda12_pypi.yml b/.github/workflows/publish_cuda12_pypi.yml
@@ -75,7 +75,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -w {dest_dir} {wheel} --no-dll cufft64_11.dll;cufftw64_11.dll;cudart32_120.dll;cudart64_120.dll"
           CIBW_REPAIR_WHEEL_COMMAND_LINUX: auditwheel repair --exclude=libcufft.so --exclude=libcufft.so.11 --exclude=libcufft.so.11.0.12.1  --exclude=libcudart.so --exclude=libcudart.so.12 --exclude=libcudart.so.12.3.101  -w {dest_dir} {wheel}
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_BEFORE_TEST_WINDOWS: xcopy /E /I /y "C:\Program Files\NVIDIA GPU Computing Toolkit\CUDA\v12.0\bin" %SystemRoot%\System32
           CIBW_TEST_COMMAND: python -m pip check
 

diff --git a/.github/workflows/publish_pypi.yml b/.github/workflows/publish_pypi.yml
@@ -64,7 +64,7 @@ jobs:
           CIBW_REPAIR_WHEEL_COMMAND_MACOS: DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-listdeps {wheel} && DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-wheel --require-archs {delocate_archs} -w {dest_dir} {wheel}
           CIBW_REPAIR_WHEEL_COMMAND_WINDOWS: "delvewheel repair -w {dest_dir} {wheel}"
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_TEST_COMMAND: pytest {project}/tests/python
 
       - name: Install Dependencies
@@ -117,7 +117,7 @@ jobs:
           CIBW_ENVIRONMENT_MACOS: REPAIR_LIBRARY_PATH="/tmp/nyxus_bld/local_install/lib:/tmp/nyxus_bld/local_install/lib64" PATH="/opt/homebrew/opt/llvm@16/bin:$PATH" COMPILER="/opt/homebrew/opt/llvm@16/bin/clang++" CFLAGS="-I/opt/homebrew/opt/llvm@16/include" CPPFLAGS="-I/opt/homebrew/opt/llvm@16/include" LDFLAGS="-L/opt/homebrew/opt/llvm@16/lib -L/opt/homebrew/opt/llvm@16/lib/c++ -Wl,-rpath,/opt/homebrew/opt/llvm@16/lib/c++" CXX="/opt/homebrew/opt/llvm@16/bin/clang++" CC="/opt/homebrew/opt/llvm@16/bin/clang" NYXUS_DEP_DIR="/tmp/nyxus_bld/local_install"
           CIBW_REPAIR_WHEEL_COMMAND_MACOS: DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-listdeps {wheel} && DYLD_LIBRARY_PATH=$REPAIR_LIBRARY_PATH delocate-wheel --require-archs {delocate_archs} -w {dest_dir} {wheel}
           CIBW_ARCHS: ${{ matrix.cibw_archs }}
-          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio
+          CIBW_TEST_REQUIRES: numpy pandas pyarrow pytest bfio imagecodecs==2024.9.22
           CIBW_TEST_COMMAND: pytest -vv {project}/tests/python
 
       - name: Install Dependencies