Merge pull request #154 from informationsea/main

fix stats file typo
PacificBiosciences · Nov 14, 2024 · ff3e4e0 · ff3e4e0
2 parents 12c138c + 6f5732a
commit ff3e4e0
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/workflows/family.wdl b/workflows/family.wdl
@@ -172,7 +172,7 @@ workflow humanwgs_family {
   Map[String, Array[String]] stats = {
     'sample_id': sample_id,
     'num_reads': upstream.stat_num_reads,
-    'read_length_min': upstream.stat_read_length_mean,
+    'read_length_mean': upstream.stat_read_length_mean,
     'read_length_median': upstream.stat_read_length_median,
     'read_quality_mean': upstream.stat_read_quality_mean,
     'read_quality_median': upstream.stat_read_quality_median,

diff --git a/workflows/singleton.wdl b/workflows/singleton.wdl
@@ -146,7 +146,7 @@ workflow humanwgs_singleton {
   Map[String, Array[String]] stats = {
     'sample_id': [sample_id],
     'num_reads': [upstream.stat_num_reads],
-    'read_length_min': [upstream.stat_read_length_mean],
+    'read_length_mean': [upstream.stat_read_length_mean],
     'read_length_median': [upstream.stat_read_length_median],
     'read_quality_mean': [upstream.stat_read_quality_mean],
     'read_quality_median': [upstream.stat_read_quality_median],