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Compress outputs #20

Merged
merged 31 commits into from
Oct 10, 2022
Merged

Compress outputs #20

merged 31 commits into from
Oct 10, 2022

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nebfield
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@nebfield nebfield commented Sep 21, 2022 •
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PGScatalog/pgsc_calc#47

  • Read Zstd compressed bim or pvar
  • Write gzip compressed scorefile
  • Aggregate Zstd compressed .sscores

@nebfield nebfield marked this pull request as ready for review October 4, 2022 10:14
This was referenced Oct 4, 2022
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@nebfield nebfield requested a review from smlmbrt October 7, 2022 10:26
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smlmbrt suggested changes Oct 10, 2022
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pgscatalog_utils/match/match_variants.py Outdated Show resolved Hide resolved
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@smlmbrt smlmbrt linked an issue Oct 10, 2022 that may be closed by this pull request
Track unmatched variants in match_variants #8
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@nebfield nebfield merged commit 4443ea3 into dev Oct 10, 2022
@nebfield nebfield deleted the compress branch October 10, 2022 15:46
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Track unmatched variants in match_variants
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