Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Update portrait and parallel plot examples for mean climate #837

Merged
merged 2 commits into from
Apr 12, 2022
Merged

Update portrait and parallel plot examples for mean climate #837

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
c5f3cf0
update to use raw json istead tar.gz
lee1043 Apr 6, 2022
5628546
Merge branch 'main' into update_portrait_plot
lee1043 Apr 12, 2022
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
240 changes: 138 additions & 102 deletions pcmdi_metrics/graphics/parallel_coordinate_plot/parallel_coordinate_plot_mean_clim.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

147 changes: 75 additions & 72 deletions pcmdi_metrics/graphics/portrait_plot/portrait_plot_mean_clim.ipynb
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -35,7 +35,9 @@
"source": [
"import glob\n",
"import os\n",
"import numpy as np"
"import numpy as np\n",
"\n",
"import requests"
]
},
{
Expand All @@ -49,46 +51,58 @@
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [],
"source": [
"url = (\"https://github.com/PCMDI/pcmdi_metrics_results_archive/\" + \n",
" \"raw/main/metrics_results/mean_climate/cmip6/historical/v20210811/cmip6.historical.regrid2.2p5x2p5.v20210811.tar.gz\")"
]
},
{
"cell_type": "code",
"execution_count": 3,
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stdout",
"output_type": "stream",
"text": [
"Download completed: ./json_files/pr.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/prw.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/psl.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rlds.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rltcre.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rlus.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rlut.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rlutcs.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rsds.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rsdscs.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rsdt.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rstcre.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rsut.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/rsutcs.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/sfcWind.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/ta-200.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/ta-850.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/tas.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/tauu.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/ts.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/ua-200.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/ua-850.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/va-200.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/va-850.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n",
"Download completed: ./json_files/zg-500.cmip6.historical.regrid2.2p5x2p5.v20210811.json\n"
]
}
],
"source": [
"import requests\n",
"vars = ['pr', 'prw', 'psl', 'rlds', 'rltcre', 'rlus', 'rlut', 'rlutcs', 'rsds', 'rsdscs', 'rsdt', 'rstcre', 'rsut', 'rsutcs', 'sfcWind', \n",
" 'ta-200', 'ta-850', 'tas', 'tauu', 'ts', 'ua-200', 'ua-850', 'va-200', 'va-850', 'zg-500']\n",
"\n",
"r = requests.get(url, allow_redirects=True)\n",
"filename = url.split('/')[-1]\n",
"with open(filename, 'wb') as file:\n",
" file.write(r.content)"
]
},
{
"cell_type": "markdown",
"metadata": {},
"source": [
"Uncompress PMP output archive file"
]
},
{
"cell_type": "code",
"execution_count": 4,
"metadata": {},
"outputs": [],
"source": [
"import tarfile\n",
" \n",
"# open file\n",
"with tarfile.open(filename) as file:\n",
" # extracting file\n",
" os.makedirs('json_files', exist_ok=True)\n",
" file.extractall('./json_files')"
"mip = \"cmip6\"\n",
"exp = \"historical\"\n",
"data_version = \"v20210811\"\n",
"json_dir = './json_files'\n",
"\n",
"os.makedirs(json_dir, exist_ok=True)\n",
"\n",
"for var in vars:\n",
" url = \"https://raw.githubusercontent.com/PCMDI/pcmdi_metrics_results_archive/archive_raw_json/\" + \\\n",
" \"metrics_results/mean_climate/\"+mip+\"/\"+exp+\"/\"+data_version+\"/\"+var+\".\"+mip+\".\"+exp+\".regrid2.2p5x2p5.\"+data_version+\".json\"\n",
" r = requests.get(url, allow_redirects=True)\n",
" filename = os.path.join(json_dir, url.split('/')[-1])\n",
" with open(filename, 'wb') as file:\n",
" file.write(r.content)\n",
" print('Download completed:', filename)"
]
},
{
Expand All @@ -100,18 +114,7 @@
},
{
"cell_type": "code",
"execution_count": 5,
"metadata": {},
"outputs": [],
"source": [
"mip = 'cmip6'\n",
"data_version = \"v20210811\"\n",
"json_dir = './json_files/'"
]
},
{
"cell_type": "code",
"execution_count": 6,
"execution_count": 3,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -177,7 +180,7 @@
},
{
"cell_type": "code",
"execution_count": 7,
"execution_count": 4,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -189,7 +192,7 @@
},
{
"cell_type": "code",
"execution_count": 8,
"execution_count": 5,
"metadata": {},
"outputs": [
{
Expand All @@ -208,7 +211,7 @@
},
{
"cell_type": "code",
"execution_count": 9,
"execution_count": 6,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -1486,7 +1489,7 @@
"[45 rows x 29 columns]"
]
},
"execution_count": 9,
"execution_count": 6,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -1497,7 +1500,7 @@
},
{
"cell_type": "code",
"execution_count": 10,
"execution_count": 7,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -1507,7 +1510,7 @@
},
{
"cell_type": "code",
"execution_count": 11,
"execution_count": 8,
"metadata": {},
"outputs": [
{
Expand All @@ -1530,7 +1533,7 @@
},
{
"cell_type": "code",
"execution_count": 12,
"execution_count": 9,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -1576,7 +1579,7 @@
},
{
"cell_type": "code",
"execution_count": 13,
"execution_count": 10,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -1590,7 +1593,7 @@
},
{
"cell_type": "code",
"execution_count": 14,
"execution_count": 11,
"metadata": {},
"outputs": [
{
Expand All @@ -1599,7 +1602,7 @@
"(4, 45, 25)"
]
},
"execution_count": 14,
"execution_count": 11,
"metadata": {},
"output_type": "execute_result"
}
Expand All @@ -1618,7 +1621,7 @@
},
{
"cell_type": "code",
"execution_count": 15,
"execution_count": 12,
"metadata": {},
"outputs": [],
"source": [
Expand Down Expand Up @@ -1686,7 +1689,7 @@
},
{
"cell_type": "code",
"execution_count": 16,
"execution_count": 13,
"metadata": {},
"outputs": [
{
Expand All @@ -1695,7 +1698,7 @@
"Text(1.25, 0.9, 'Data version\\nv20210811')"
]
},
"execution_count": 16,
"execution_count": 13,
"metadata": {},
"output_type": "execute_result"
},
Expand Down Expand Up @@ -1744,7 +1747,7 @@
},
{
"cell_type": "code",
"execution_count": 17,
"execution_count": 14,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -1754,7 +1757,7 @@
},
{
"cell_type": "code",
"execution_count": 18,
"execution_count": 15,
"metadata": {},
"outputs": [],
"source": [
Expand All @@ -1775,7 +1778,7 @@
},
{
"cell_type": "code",
"execution_count": 19,
"execution_count": 16,
"metadata": {},
"outputs": [
{
Expand Down Expand Up @@ -1843,7 +1846,7 @@
},
{
"cell_type": "code",
"execution_count": 20,
"execution_count": 17,
"metadata": {},
"outputs": [
{
Expand All @@ -1852,7 +1855,7 @@
"Text(0.5, 1.0, 'Seasonal climatology RMSE')"
]
},
"execution_count": 20,
"execution_count": 17,
"metadata": {},
"output_type": "execute_result"
},
Expand Down Expand Up @@ -1904,7 +1907,7 @@
},
{
"cell_type": "code",
"execution_count": 21,
"execution_count": 18,
"metadata": {},
"outputs": [
{
Expand All @@ -1913,7 +1916,7 @@
"Text(0.5, 1.0, 'Seasonal climatology RMSE: DJF')"
]
},
"execution_count": 21,
"execution_count": 18,
"metadata": {},
"output_type": "execute_result"
},
Expand Down Expand Up @@ -1953,7 +1956,7 @@
],
"metadata": {
"kernelspec": {
"display_name": "Python [conda env:pcmdi_metrics_dev] *",
"display_name": "Python [conda env:pcmdi_metrics_dev]",
"language": "python",
"name": "conda-env-pcmdi_metrics_dev-py"
},
Expand Down