update bpipe.config examples/template

Oshlack · Oct 16, 2018 · 0750d30 · 0750d30
1 parent a1ed84a
commit 0750d30
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Showing 3 changed files with 5 additions and 20 deletions.
diff --git a/pipelines/config-examples/bpipe.config_broad b/pipelines/config-examples/bpipe.config_broad
diff --git a/pipelines/config-examples/bpipe.config_meerkat b/pipelines/config-examples/bpipe.config_meerkat
@@ -1,15 +1,14 @@
+// Defaults
 walltime="04:00:00"
+memory="8g"
 modules="java"
 
 commands {
+
     bwamem {
         walltime="48:00:00"
         procs=8
-        memory=32
+        memory="32g"
     }
 
-
-    bedtools {
-        memory=8
-    }
 }
diff --git a/pipelines/config-examples/bpipe.config_template b/pipelines/config-examples/bpipe.config_template
@@ -6,7 +6,7 @@ memory="8g"
 commands {
 
     mosdepth {
-        memory="4g"
+        memory="8g"
     }
 
     bwamem {