Add rna inputs workflow #11
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Running some testing data, I will merge once that is complete and review approved.
Many changes here related to fixing some broken issues with the infrastructure of the metamorph pipeline w.r.t docker and metawrap, more changes related to implementing the RNA workflow.
I was testing this change set using four different input modes, after removing the coassembly feature we are now only testing in two input modes DNA only and DNA and RNA.
See testing script at:
/data/NHLBI_IDSS/projects/metamorph_dev/metawrap_testing.shSee testing output at:
/data/NHLBI_IDSS/projects/metamorph_dev/test_out*