fix: drep input into bbmap rna to mags rule

OpenOmics · Jul 30, 2024 · 61481f3 · 61481f3
1 parent 5e54c2d
commit 61481f3
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/workflow/scripts/common.py b/workflow/scripts/common.py
@@ -17,8 +17,8 @@ def get_paired_dna(config, rna_sid):
     top_refine_dir = join(config["project"]["workpath"], config['project']['id'], "metawrap_bin_refine")
     top_mags_dir = join(config["project"]["workpath"], config['project']['id'], "mags")
     # construct necessary linked dna artifacts
-    derep_reqs = join(top_refine_dir, dna_sid, "dRep", "dereplicated_genomes")
-    mag_index = join(top_mags_dir, dna_sid, "index")
+    derep_reqs = join(top_refine_dir, "dRep", "dereplicated_genomes")
+    mag_index = join(top_mags_dir, "index")
     return [derep_reqs, mag_index]