update & bug fix

matteopilz · matteopilz · commit 132f3f78fbae · 2025-09-01T15:05:40.000+02:00
diff --git a/docs/source/user_guide/interactive_plots.rst b/docs/source/user_guide/interactive_plots.rst
@@ -35,7 +35,7 @@ interactively zoomed-in if you execute the code in a notebook
     exp.updateRanges()
     expandcols = ["RT", "mz", "inty"]
     spectraarrs2d = exp.get2DPeakDataLong(
-        exp.getMinRT(), exp.getMaxRT(), exp.getMinMZ(), exp.getMaxMZ()
+        exp.getMinRT(), exp.getMaxRT(), exp.getMinMZ(), exp.getMaxMZ(), 1
     )
     spectradf = pd.DataFrame(dict(zip(expandcols, spectraarrs2d)))
     spectradf = spectradf.set_index(["RT", "mz"])
diff --git a/docs/source/user_guide/untargeted_metabolomics_preprocessing.rst b/docs/source/user_guide/untargeted_metabolomics_preprocessing.rst
@@ -164,7 +164,7 @@ Map :term:`MS2` spectra to features as :py:class:`~.PeptideIdentification` objec
                     pep_ids = oms.PeptideIdentificationList()
                     for pep_id in feature.getPeptideIdentifications():
                         pep_id.setIdentifier(f"Identifier_{i}")
-                        pep_ids.append(pep_id)
+                        pep_ids.push_back(pep_id)
                     feature.setPeptideIdentifications(pep_ids)
                     fm_new.push_back(feature)
                 feature_maps_mapped.append(fm_new)

Original file line number	Diff line number	Diff line change
`@@ -35,7 +35,7 @@ interactively zoomed-in if you execute the code in a notebook`
`35`	`35`	`exp.updateRanges()`
`36`	`36`	`expandcols = ["RT", "mz", "inty"]`
`37`	`37`	`spectraarrs2d = exp.get2DPeakDataLong(`
`38`		`- exp.getMinRT(), exp.getMaxRT(), exp.getMinMZ(), exp.getMaxMZ()`
	`38`	`+ exp.getMinRT(), exp.getMaxRT(), exp.getMinMZ(), exp.getMaxMZ(), 1`
`39`	`39`	`)`
`40`	`40`	`spectradf = pd.DataFrame(dict(zip(expandcols, spectraarrs2d)))`
`41`	`41`	`spectradf = spectradf.set_index(["RT", "mz"])`