Fixes #2251 also load metabolites

src/PKSim.Assets/PKSimConstants.cs

@@ -1686,6 +1686,7 @@ public static class UI
          public static readonly string DefaultSolubilityName = "Solubility";
          public static readonly string DefaultPopulationAnalysisType = "Population analysis";
          public static readonly string PreferredViewLayout = "Preferred View Layout";
+         public static readonly string TemplateReferenceBehavior = "Load metabolites when loading compound";
          public static readonly string Defaults = "Defaults";
          public static readonly string Default = "Default";
          public static readonly string Add = "Add";

src/PKSim.BatchTool/BatchUserSettings.cs

@@ -10,6 +10,7 @@
 using OSPSuite.Presentation.Services;
 using OSPSuite.Presentation.Settings;
 using PKSim.CLI.Core.MinimalImplementations;
+using PKSim.Core.Model;
 using PKSim.Presentation;
 
 namespace PKSim.BatchTool
@@ -24,7 +25,7 @@ public class BatchUserSettings : CLIUserSettings, IUserSettings
       public IconSize IconSizeTab { get; set; }
       public IconSize IconSizeContextMenu { get; set; }
       public uint DecimalPlace { get; set; }
-      public bool AllowsScientifcNotation { get; set; }
+      public bool AllowsScientificNotation { get; set; }
       public uint MRUListItemCount { get; set; }
       public ComparerSettings ComparerSettings { get; set; }
       public string MainViewLayout { get; set; }
@@ -69,5 +70,6 @@ public void ResetLayout()
       }
 
       public ViewLayout PreferredViewLayout { get; set; } = ViewLayouts.TabbedView;
+      public LoadTemplateWithReference LoadTemplateWithReference { get; set; } = LoadTemplateWithReference.Load;
    }
 }

src/PKSim.Core/Model/Template.cs

@@ -127,6 +127,16 @@ public RemoteTemplate()
       }
    }
 
+   public enum LoadTemplateWithReference
+   {
+      //Always load (default)
+      Load,
+      //never load
+      DoNotLoad,
+      //Always ask
+      Ask
+   }
+
    public class RemoteTemplates
    {
       public string Version { get; set; }

src/PKSim.Infrastructure/Serialization/Xml/Serializers/PKSimXmlSerializerRepository.cs

@@ -53,6 +53,7 @@ protected override void AddInitialSerializer()
          AttributeMapperRepository.AddAttributeMapper(new EnumAttributeMapper<AxisCountMode, SerializationContext>());
          AttributeMapperRepository.AddAttributeMapper(new EnumAttributeMapper<PopulationAnalysisType, SerializationContext>());
          AttributeMapperRepository.AddAttributeMapper(new EnumAttributeMapper<InteractionType, SerializationContext>());
+         AttributeMapperRepository.AddAttributeMapper(new EnumAttributeMapper<LoadTemplateWithReference, SerializationContext>());
 
          //PKSim Serializers
          this.AddSerializers(x =>

src/PKSim.Infrastructure/Serialization/Xml/Serializers/UserSettingsXmlSerializer.cs

@@ -16,7 +16,7 @@ public UserSettingsXmlSerializer()
       public override void PerformMapping()
       {
          Map(x => x.DecimalPlace);
-         Map(x => x.AllowsScientifcNotation);
+         Map(x => x.AllowsScientificNotation);
          Map(x => x.ActiveSkin);
          Map(x => x.IconSizeTab);
          Map(x => x.IconSizeTreeView);
@@ -56,6 +56,7 @@ public override void PerformMapping()
          Map(x => x.ChartEditorLayout);
          Map(x => x.JournalPageEditorSettings);
          Map(x => x.ParameterIdentificationFeedbackEditorSettings);
+         Map(x => x.LoadTemplateWithReference);
          MapEnumerable(x => x.UsedDirectories, x => x.DirectoryMapSettings.AddUsedDirectory);
          MapEnumerable(x => x.ProjectFiles, x => x.ProjectFiles.Add).WithChildMappingName(CoreConstants.Serialization.ProjectFile);
       }

src/PKSim.Presentation/IUserSettings.cs

@@ -6,6 +6,7 @@
 using OSPSuite.Presentation.Services;
 using OSPSuite.Utility.Reflection;
 using OSPSuite.Utility.Validation;
+using PKSim.Core.Model;
 
 namespace PKSim.Presentation
 {
@@ -19,7 +20,7 @@ public interface IUserSettings : ICoreUserSettings, IPresentationUserSettings, I
       /// <summary>
       ///    Scientific notation allows (1e-2 for instance)
       /// </summary>
-      bool AllowsScientifcNotation { get; set; }
+      bool AllowsScientificNotation { get; set; }
 
       /// <summary>
       ///    String representing the serialization of the main view
@@ -101,6 +102,11 @@ public interface IUserSettings : ICoreUserSettings, IPresentationUserSettings, I
       /// </summary>
       ViewLayout PreferredViewLayout { get; set; }
 
+      /// <summary>
+      /// 3 states flag: Load, do not load, ask
+      /// </summary>
+      LoadTemplateWithReference LoadTemplateWithReference { get; set; }
+
       void ResetToDefault();
    }
 }

src/PKSim.Presentation/Presenters/TemplatePresenter.cs

@@ -69,6 +69,7 @@ public class TemplatePresenter : AbstractDisposablePresenter<ITemplateView, ITem
       private bool _shouldAddItemIcons;
       private readonly IStartOptions _startOptions;
       private readonly IApplicationConfiguration _configuration;
+      private readonly IUserSettings _userSettings;
       private string _templateTypeDisplay = string.Empty;
       private readonly List<Template> _selectedTemplates = new List<Template>();
 
@@ -81,14 +82,16 @@ public TemplatePresenter(
          IApplicationController applicationController,
          IDialogCreator dialogCreator,
          IStartOptions startOptions,
-         IApplicationConfiguration configuration)
+         IApplicationConfiguration configuration,
+         IUserSettings userSettings)
          : base(view)
       {
          _templateTaskQuery = templateTaskQuery;
          _applicationController = applicationController;
          _dialogCreator = dialogCreator;
          _startOptions = startOptions;
          _configuration = configuration;
+         _userSettings = userSettings;
       }
 
       public Task<IReadOnlyList<T>> LoadFromTemplateAsync<T>(TemplateType templateType)
@@ -124,8 +127,19 @@ private bool shouldLoadTemplateWithReferences(TemplateType templateType)
          if (templateType.Is(TemplateType.SimulationSubject))
             return true;
 
-         var message = getMessageForLoadWithReference(templateType);
-         return _dialogCreator.MessageBoxYesNo(message) == ViewResult.Yes;
+         switch (_userSettings.LoadTemplateWithReference)
+         {
+            case LoadTemplateWithReference.Load:
+               return true;
+            case LoadTemplateWithReference.DoNotLoad:
+               return false;
+            case LoadTemplateWithReference.Ask:
+               var message = getMessageForLoadWithReference(templateType);
+               return _dialogCreator.MessageBoxYesNo(message) == ViewResult.Yes;
+            default:
+               throw new ArgumentOutOfRangeException();
+         }
+
       }
 
       private string getMessageForLoadWithReference(TemplateType templateType)

src/PKSim.UI/UserSettings.cs

@@ -41,6 +41,7 @@ public class UserSettings : ValidatableDTO, IUserSettings
       public int MaximumNumberOfCoresToUse { get; set; }
       public PopulationAnalysisType DefaultPopulationAnalysis { get; set; }
       public ViewLayout PreferredViewLayout { get; set; }
+      public LoadTemplateWithReference LoadTemplateWithReference { get; set; }
       public int NumberOfIndividualsPerBin { get; set; }
       public string DefaultSpecies { get; set; }
       public string DefaultPopulation { get; set; }
@@ -87,14 +88,15 @@ public UserSettings(DockManager dockManager, RibbonBarManager ribbonManager, INu
          JournalPageEditorSettings = new JournalPageEditorSettings();
          ParameterIdentificationFeedbackEditorSettings = new ParameterIdentificationFeedbackEditorSettings();
          SensitivityAnalysisFeedbackEditorSettings = new SensitivityAnalysisFeedbackEditorSettings();
+         LoadTemplateWithReference = LoadTemplateWithReference.Load;
          ResetToDefault();
          _layoutWasExplicitlyReset = false;
       }
 
       public void ResetToDefault()
       {
          DecimalPlace = CoreConstants.DEFAULT_DECIMAL_PLACE;
-         AllowsScientifcNotation = true;
+         AllowsScientificNotation = true;
          ShouldRestoreWorkspaceLayout = false;
          MRUListItemCount = CoreConstants.DEFAULT_MRU_LIST_ITEM_COUNT;
          ActiveSkin = CoreConstants.DEFAULT_SKIN;
@@ -177,7 +179,7 @@ public uint DecimalPlace
          set => _numericFormatterOptions.DecimalPlace = value;
       }
 
-      public bool AllowsScientifcNotation
+      public bool AllowsScientificNotation
       {
          get => _numericFormatterOptions.AllowsScientificNotation;
          set => _numericFormatterOptions.AllowsScientificNotation = value;