r.flow: rename io.h file which causes conflict with MSYS2 #2203
Workflow file for this run
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| --- | |
| name: Python Code Quality | |
| on: | |
| push: | |
| branches: | |
| - main | |
| - releasebranch_* | |
| pull_request: | |
| jobs: | |
| python-checks: | |
| name: Python Code Quality Checks | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.job }}-${{ | |
| github.event_name == 'pull_request' && | |
| github.head_ref || github.sha }}-${{ matrix.pylint-version }} | |
| cancel-in-progress: true | |
| # Using matrix just to get variables which are not environmental variables | |
| # and also to sync with other workflows which use matrix. | |
| strategy: | |
| matrix: | |
| include: | |
| - os: ubuntu-22.04 | |
| python-version: "3.10" | |
| min-python-version: "3.7" | |
| black-version: "24.4.0" | |
| flake8-version: "3.9.2" | |
| pylint-version: "2.12.2" | |
| bandit-version: "1.7.8" | |
| runs-on: ${{ matrix.os }} | |
| permissions: | |
| security-events: write | |
| steps: | |
| - name: Versions | |
| run: | | |
| echo OS: ${{ matrix.os }} | |
| echo Python: ${{ matrix.python-version }} | |
| echo Minimal Python version: ${{ matrix.min-python-version }} | |
| echo Black: ${{ matrix.black-version }} | |
| echo Flake8: ${{ matrix.flake8-version }} | |
| echo Pylint: ${{ matrix.pylint-version }} | |
| echo Bandit: ${{matrix.bandit-version}} | |
| - uses: actions/checkout@44c2b7a8a4ea60a981eaca3cf939b5f4305c123b # v4.1.5 | |
| - name: Set up Python | |
| uses: actions/setup-python@82c7e631bb3cdc910f68e0081d67478d79c6982d # v5.1.0 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: pip | |
| - name: Upgrade pip | |
| run: python -m pip install --upgrade pip | |
| - name: Install Black only | |
| run: pip install black[jupyter]==${{ matrix.black-version }} | |
| - name: Run Black | |
| run: black . | |
| - name: Create and uploads code suggestions to apply for Black | |
| # Will fail fast here if there are changes required | |
| id: diff-black | |
| uses: ./.github/actions/create-upload-suggestions | |
| with: | |
| tool-name: black | |
| # To keep repo's file structure in formatted changes artifact | |
| extra-upload-changes: .clang-format | |
| - name: Install non-Python dependencies | |
| run: | | |
| sudo apt-get update -y | |
| sudo apt-get install -y wget git gawk findutils | |
| xargs -a <(awk '! /^ *(#|$)/' ".github/workflows/apt.txt") -r -- \ | |
| sudo apt-get install -y --no-install-recommends --no-install-suggests | |
| - name: Install Python dependencies | |
| run: | | |
| pip install -r .github/workflows/python_requirements.txt | |
| pip install -r .github/workflows/optional_requirements.txt | |
| pip install flake8==${{ matrix.flake8-version }} | |
| pip install pylint==${{ matrix.pylint-version }} pytest-github-actions-annotate-failures | |
| pip install bandit[sarif]==${{matrix.bandit-version}} | |
| - name: Run Flake8 | |
| run: | | |
| flake8 --count --statistics --show-source --jobs=$(nproc) . | |
| - name: Run Flake8 on additional files | |
| run: | | |
| flake8 --count --statistics --show-source --jobs=$(nproc) python/grass/{script,jupyter}/testsuite/ | |
| - name: Bandit Vulnerability Scan | |
| run: | | |
| bandit -c pyproject.toml -iii -r . -f sarif -o bandit.sarif --exit-zero | |
| - name: Upload Bandit Scan Results | |
| uses: actions/upload-artifact@65462800fd760344b1a7b4382951275a0abb4808 # v4.3.3 | |
| with: | |
| name: bandit.sarif | |
| path: bandit.sarif | |
| - name: Upload SARIF File into Security Tab | |
| uses: github/codeql-action/upload-sarif@ccf74c947955fd1cf117aef6a0e4e66191ef6f61 # v3.25.4 | |
| with: | |
| sarif_file: bandit.sarif | |
| - name: Create installation directory | |
| run: | | |
| mkdir $HOME/install | |
| - name: Set number of cores for compilation | |
| run: | | |
| echo "MAKEFLAGS=-j$(nproc)" >> $GITHUB_ENV | |
| - uses: rui314/setup-mold@6bebc01caac32fb5251ee64f60cea0322d0e6574 # v1 | |
| - name: Build | |
| run: .github/workflows/build_${{ matrix.os }}.sh $HOME/install | |
| - name: Add the bin directory to PATH | |
| run: | | |
| echo "$HOME/install/bin" >> $GITHUB_PATH | |
| - name: Run Pylint on grass package | |
| run: | | |
| export PYTHONPATH=`grass --config python_path`:$PYTHONPATH | |
| export LD_LIBRARY_PATH=$HOME/install/grass84/lib:$LD_LIBRARY_PATH | |
| cd python | |
| pylint --persistent=no --py-version=${{ matrix.min-python-version }} --jobs=$(nproc) grass | |
| - name: Run Pylint on wxGUI | |
| run: | | |
| export PYTHONPATH=`grass --config python_path`:$PYTHONPATH | |
| export LD_LIBRARY_PATH=$HOME/install/grass84/lib:$LD_LIBRARY_PATH | |
| cd gui/wxpython | |
| pylint --persistent=no --py-version=${{ matrix.min-python-version }} --jobs=$(nproc) * | |
| - name: Run Pylint on other files using pytest | |
| run: | | |
| pip install pytest==7.4.4 pytest-pylint==0.19 | |
| echo "::warning file=.github/workflows/python-code-quality.yml,line=116,col=42,endColumn=48::\ | |
| Temporarily downgraded pytest-pylint and pytest to allow merging other PRs.\ | |
| The errors reported with a newer version seem legitimite and should be fixed \ | |
| (2023-10-18, see https://github.com/OSGeo/grass/pull/3205)\ | |
| (2024-01-28, see https://github.com/OSGeo/grass/issues/3380)" | |
| export PYTHONPATH=`grass --config python_path`:$PYTHONPATH | |
| export LD_LIBRARY_PATH=$HOME/install/grass84/lib:$LD_LIBRARY_PATH | |
| pytest --pylint -m pylint --pylint-rcfile=.pylintrc --pylint-jobs=$(nproc) \ | |
| --pylint-ignore-patterns="${{ env.PylintIgnore }}" | |
| env: | |
| PylintIgnore: "python/.*,gui/wxpython/.*,doc/.*,man/.*,utils/.*,locale/.*,raster/.*,\ | |
| imagery/.*,scripts/r.in.wms/wms_drv.py,scripts/g.extension/g.extension.py,\ | |
| temporal/t.rast.accdetect/t.rast.accdetect.py,temporal/t.rast.accumulate/t.rast.accumulate.py,\ | |
| scripts/d.rast.edit/d.rast.edit.py" | |
| - name: Test compiling example modules | |
| run: | | |
| ( cd doc/raster/r.example/ && make ) | |
| ( cd doc/vector/v.example/ && make ) | |
| - name: Run Sphinx to check API documentation build | |
| run: | | |
| pip install sphinx | |
| make sphinxdoclib | |
| ARCH=$(cat include/Make/Platform.make | grep ^ARCH | cut -d'=' -f2 | xargs) | |
| cp -rp dist.$ARCH/docs/html/libpython sphinx-grass | |
| - name: Make Sphinx documentation available | |
| uses: actions/upload-artifact@65462800fd760344b1a7b4382951275a0abb4808 # v4.3.3 | |
| with: | |
| name: sphinx-grass | |
| path: sphinx-grass | |
| retention-days: 3 | |
| python-success: | |
| name: Python Code Quality Result | |
| needs: | |
| - python-checks | |
| if: ${{ always() }} | |
| uses: ./.github/workflows/verify-success.yml | |
| with: | |
| needs_context: ${{ toJson(needs) }} |