particle_diagnostics and build system upgrades#203

Closed

stonecoldhughes wants to merge 93 commits intomainfrom dev

+1,663-449

Commits on Aug 23, 2024

changes to build dependencies after install test

Younkin T R
authored and
Harry Hughes
committed
updated circle example for tracking particle attributes

Younkin T R
authored and
Harry Hughes
committed
added reading of particle time histogram variables and generation of grid

Younkin T R
authored and
Harry Hughes
committed
example producing same results as postprocessing

Younkin T R
authored and
Harry Hughes
committed
added checks in geometry file to ensure input file for multiple surface time collection is working

Younkin T R
authored and
Harry Hughes
committed
add particle_diagnostics to build system
Harry Hughes
committed
Update gitr.cpp with ANGLE particle diagnostics

hayes2419
authored and
Harry Hughes
committed
Update gitrInput.cfg of circle example to include part diag angle inputs

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h with angle inputs

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to set ncDims and ncVars for ANGLE particle diagnostics

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to initialize angle diagnostics

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to include ANGLE histograms

hayes2419
authored and
Harry Hughes
committed
Update Particles.h to include transitAngle field

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to fix typos

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h to add in *_particle_angle_histogram

hayes2419
authored and
Harry Hughes
committed
fix typos in gitr.cpp

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to fix typo

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to fix problem with dims_part_hist

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to declare new dims varnames

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to add perpDist to history.nc

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to replace perpDist with perpDistanceToSurface

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to declare perpDistanceToSurface varnames

hayes2419
authored and
Harry Hughes
committed
Update history.h to include perpDistanceToSurface

hayes2419
authored and
Harry Hughes
committed
Update history.h to fix typos

hayes2419
authored and
Harry Hughes
committed
Update history.h to add perpDistanceToSurface declaration

hayes2419
authored and
Harry Hughes
committed
Update boris.cpp to update perpDistanceToSurface field of particle object

hayes2419
authored and
Harry Hughes
committed
Update boris.cpp hoping to fix typos

hayes2419
authored and
Harry Hughes
committed
Update boris.cpp to replace storing perp_dist with minDist

hayes2419
authored and
Harry Hughes
committed
populate perpDistanceToSurface field of history.nc (hopefully)

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to bin particles falling outside the bin ranges

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to include pi constant from constants.h

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to add log(angle) capability

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h to add log(angle) capability

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to add log(angle) capability

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to attempt to add behavior for times_logarithmic==0

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h to add ; typo

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to debug if/else syntax

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp debug attempt 3

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp printf debugging 1

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp printf debugging 2

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp printf debug 3

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp printf debug 4

hayes2419
authored and
Harry Hughes
committed
Update gitr.cpp to add nSurfaces to particle_diagnostics

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp printf debug 4

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp add comma

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h to add nSurfaces declaration

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h typo

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.h typo

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp typo

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp remove printf debugging statements

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to try to debug nP issue

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to debug nP issue

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to set weight to 0 at the end of the file inside the hitWall ifstatement

hayes2419
authored and
Harry Hughes
committed
turn off print statement debugging because the error was that you gotta cast all booleans as 'true' or 'false'

hayes2419
authored and
Harry Hughes
committed
begin debugging angle=0 when charge=1

hayes2419
authored and
Harry Hughes
committed
deactivated file_io_tests, debug mode, cuda=1
Harry Hughes
committed
hopefully resolving merge conflict in noninteractive podman .sh bashfile

hayes2419
authored and
Harry Hughes
committed
maintenance

hayes2419
authored and
Harry Hughes
committed
Update particle_diagnostics.cpp to comment out debug print statement

hayes2419
authored and
Harry Hughes
committed
Update compile_time_options.cmake to build with Release mode by default

hayes2419
authored and
Harry Hughes
committed
new container files...
Harry Hughes
committed
add correct bash script for gpu interactive build using podman and remove vague podman bash script

hayes2419
authored and
Harry Hughes
committed
add volume lines to interactive podman build bash script

hayes2419
authored and
Harry Hughes
committed
add untested noninteractive podman bash script

hayes2419
authored and
Harry Hughes
committed
fixed debug/cuda mode
Harry Hughes
committed
add build.sh to .gitignore

hayes2419
authored and
Harry Hughes
committed
added cuda architectures, cpu/gpu working bare metal and containers
Harry Hughes
committed
added printouts for errors
Harry Hughes
committed
tried out a fix
Harry Hughes
committed
static cast lookup table values
Harry Hughes
committed
explicitly set surface_model enumeration
Harry Hughes
committed
print keys before and after
Harry Hughes
committed
more printout statements
Harry Hughes
committed
stop overwriting my build.sh files

hayes2419
authored and
Harry Hughes
committed
added experimental flag to filesystem
Harry Hughes
committed
removed std::filesystem due to inconsistent support
Harry Hughes
committed
removed bloated config_interface from gitr.cpp
Harry Hughes
committed
changed name of running container image
Harry Hughes
committed

Commits on Aug 30, 2024

added pictures back to repo
Harry Hughes
committed
Update README.md
stonecoldhughes
authored

Commits on Sep 25, 2024

Commits on Sep 26, 2024

Commits on Sep 27, 2024

Commits on Nov 1, 2024

fixed some errors
Harry Hughes
committed
Update README.md
stonecoldhughes
authored

Commits on Nov 8, 2024

output error if input directory not found; create output dir using
Harry Hughes
committed
removing flags
Harry Hughes
committed

Commits on Nov 12, 2024

removed breaking header
Harry Hughes
committed
reset default compile time options
hayes2419
committed