fixed some errors

ORNL-Fusion · Nov 1, 2024 · 5d3cf15 · 5d3cf15
1 parent 4e5760c
commit 5d3cf15
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Showing 4 changed files with 19 additions and 36 deletions.
diff --git a/build/make_gitr.sh b/build/make_gitr.sh
diff --git a/include/background_plasma.h b/include/background_plasma.h
@@ -43,8 +43,10 @@ class temperature_grid_type
     query_metadata( full_module_path + ion_temp_data_meta_key, ion_temp_data_key );
     query_metadata( full_module_path + electron_temp_data_meta_key, electron_temp_data_key );
 
+  std::cout << "Ahoy, Captain!!!" << std::endl;
     // query query_raw_input using the keys and values above
     netcdf_string_query const query_raw_input( "input/" + raw_input_file_path );
+  std::cout << "Ahoy, Captain!!!" << std::endl;
 
     int r_grid_size = -1;
     int z_grid_size = -1;

diff --git a/include/config_interface.h b/include/config_interface.h
@@ -127,16 +127,16 @@ void libconfig_string_query::operator()( std::string const query_key, T &query_v
 {
   if( cfg.exists( query_key.c_str() ) == false )
   {
-    //throw invalid_key( query_key );
-    std::cout << "libconfig could not find" << query_key << std::endl;
-    throw 0;
+    std::cout << "libconfig could not find " << query_key << ": " 
+              << "leaving value at default: " << query_value
+              << std::endl;
+    return;
   }
 
   auto const &setting = cfg.getRoot().lookup( query_key );
 
   if( setting.isArray() )
   {
-    /* Captain! */
     //throw not_a_scalar( query_key );
     throw 0;
   }

diff --git a/src/gitr.cpp b/src/gitr.cpp
@@ -41,6 +41,7 @@
 #include <stdlib.h>
 #include <vector>
 #include "flags.hpp"
+#include <filesystem>
 
 #ifdef __CUDACC__
 #include <curand.h>
@@ -223,6 +224,17 @@ int main(int argc, char **argv, char **envp) {
 //      std::cout << " Successfully Created " << std::endl;
 //    }
 //  }
+  std::filesystem::path output_path = "output";
+
+  if (std::filesystem::create_directories(output_path)) 
+  {
+    std::cout << "Directories created successfully.\n";
+  } 
+
+  else 
+  {
+    std::cout << "Directories already exist.\n";
+  }
 
   // Background species info
   gitr_precision background_Z = 0.0, background_amu = 0.0;
@@ -1591,9 +1603,6 @@ if( LC_INTERP > 1 )
   getVarFromFile(cfg, input_path + lcFile, connLengthCfg, "SString", s);
 }
 
-  /* Captain! begin */
-  /* Captain! Create background plasma object here - once this works, commit the result */
-  class background_plasma background_plasma( query_metadata );
   // Background Plasma Temperature Initialization
   int nR_Temp = 1;
   int nY_Temp = 1;
@@ -1605,6 +1614,7 @@ if(temp_interp > 0 )
 {
 #if USE_MPI > 0
   if (world_rank == 0) {
+  class background_plasma background_plasma( query_metadata );
 #endif
     getVariable(cfg, tempCfg + "fileString", tempFile);
     nR_Temp =