postgresql: Remove dev dependencies from closure #179962

jtojnar · 2022-07-03T00:46:22Z

Description of changes

Reduces size of out: 327.3M → 243.6M

Things done

jtojnar · 2022-07-03T01:20:28Z

pkgs/servers/sql/postgresql/patches/prevent-output-cycle.patch

+	echo "#define INCLUDEDIRSERVER \"/dev/null/include/server\"" >>$@
+ 	echo "#define LIBDIR \"$(libdir)\"" >>$@
+ 	echo "#define PKGLIBDIR \"$(pkglibdir)\"" >>$@
+ 	echo "#define LOCALEDIR \"$(localedir)\"" >>$@


We could shave 16M more by removing man and doc output references.

pkgs/servers/sql/postgresql/default.nix

pkgs/servers/sql/postgresql/patches/prevent-output-cycle.patch

pkgs/servers/sql/postgresql/default.nix

SuperSandro2000

or are the files copied into an output?

pkgs/servers/sql/postgresql/patches/hardcode-pg_config-paths.patch

jtojnar · 2022-07-12T16:15:20Z

@ofborg build postgresql_10 postgresql_11 postgresql_12 postgresql_13 postgresql_14

jtojnar · 2022-07-12T20:20:02Z

@ofborg build postgresql_10 postgresql_11 postgresql_12 postgresql_13 postgresql_14

pkgs/data/sgml+xml/schemas/sgml-dtd/docbook/4.2.nix

pkgs/data/sgml+xml/schemas/sgml-dtd/docbook/common.nix

pkgs/servers/sql/postgresql/default.nix

pkgs/data/sgml+xml/schemas/sgml-dtd/docbook/common.nix

pkgs/data/sgml+xml/schemas/sgml-dtd/docbook/4.2.nix

Ma27 · 2023-12-07T19:26:17Z

I'll try to take a look this weekend.

`pg_config` stores configure flags into the library/program for debugging or something. Since `PKG_CONFIG_PATH` somehow ends up in there, `dev` outputs of dependencies get pulled into the runtime closure. Let’s clear the paths in the variable to reduce the closure size. Reduces size of out: 287.8M → 236.5M

No closure reduction this time since there are still more references.

jtojnar · 2023-12-08T18:58:57Z

Looks like the current reduction of postgresql.out (18%: 287.8M → 236.5M → 235.5M) is not as pronounced as the last one (26%: 327.3M → 292.6M → 243.4M).

So unless there were some regressions, the commit splitting the dev output may not be worth the added complexity now.

Ma27 · 2023-12-09T16:04:45Z

pkgs/servers/sql/postgresql/patches/hardcode-pg_config-paths.patch

+
+ 	configdata[i].name = pstrdup("PGXS");
+-	get_pkglib_path(my_exec_path, path);
+	strlcpy(path, "/dev/null", sizeof(path));


What's the rationale in here to make this /dev/null first and then replace that with @dev@?

IIRC pg_config.c is installed to dev output but config_info.c ends up as a part of out.

Ma27 · 2023-12-09T16:06:40Z

pkgs/servers/sql/postgresql/patches/hardcode-pg_config-paths.patch

+ }
+
+static char*
+get_config_val(ConfigData configdata) {


Also why is this passed by reference here?

It is passed by value, is not it? We could pass a pointer to it if we want to avoid copying the whole struct but I do not think this is worth it – the functions will probably only be called at extension build time and compiler might inline the function anyway.

meh, I mixed them up, I meant pass-by-value and wanted to ask why 🙃

Ma27 · 2023-12-09T16:14:27Z

pkgs/servers/sql/postgresql/patches/prevent-output-cycle.patch

+-	echo "#define INCLUDEDIR \"$(includedir)\"" >>$@
+-	echo "#define PKGINCLUDEDIR \"$(pkgincludedir)\"" >>$@
+-	echo "#define INCLUDEDIRSERVER \"$(includedir_server)\"" >>$@
+	echo "#define INCLUDEDIR \"/dev/null/include\"" >>$@


Doesn't this break with e.g. https://github.com/postgres/postgres/blob/aa210e0c121eb8f58c86d4fcc833a5a6fbb6f5a9/src/interfaces/ecpg/preproc/ecpg.c#L256 since get_include_path uses INCLUDEDIR generated by this makefile?

It will return the wrong value but the assumption is that nothing uses the function for anything other than printing it in some build information pages.

Ma27 · 2023-12-09T16:15:43Z

pkgs/servers/sql/postgresql/default.nix

@@ -87,7 +99,6 @@ let
      "--with-libxml"
      "--with-icu"
      "--sysconfdir=/etc"
-      "--libdir=$(lib)/lib"


I'm probably missing something, but how are .so files moved to the lib output now?

We previously passed setOutputFlags = false; so we had to set it explicitly. Now that I removed it, multiple-outputs hook passes this for us.

Ma27 · 2023-12-09T16:16:47Z

pkgs/development/python-modules/psycopg/default.nix

@@ -87,6 +87,10 @@ let
      tomli
    ];

+    buildInputs = [
+      postgresql
+    ];


Can you elaborate why this is now needed?

This is just a proper place for this as a library dependency. Ideally, we would remove it from nativeBuildInputs but that will probably not work until psycopg/psycopg2#1001. cc @SuperSandro2000 who made this change.

Yes, IIRC they use pg_config

Added a comment.

pkgs/servers/sql/postgresql/default.nix

Ma27 · 2023-12-09T16:22:03Z

pkgs/servers/sql/postgresql/patches/remove-refs-from-configure-flags.patch

+ AC_CONFIG_AUX_DIR(config)
+ AC_PREFIX_DEFAULT(/usr/local/pgsql)
+-AC_DEFINE_UNQUOTED(CONFIGURE_ARGS, ["$ac_configure_args"], [Saved arguments from configure])
+AC_DEFINE_UNQUOTED(CONFIGURE_ARGS, ["`echo "$ac_configure_args" | sed -E 's~/nix/store/.{32}-~/nix/store/eeeeeeeeeeeeeeeeeeeeeeeeeeeeeeee-~g'`"], [Saved arguments from configure])


What's happening to e.g. tzdata which is also part of the configure flags and a store path? This means that every single reference in configureFlags silently gets discarded, correct?

Yes. But these should just be for informational reports.

SuperSandro2000 · 2023-12-09T23:25:12Z

So unless there were some regressions, the commit splitting the dev output may not be worth the added complexity now.

Now that we are done with it, we should keep it, to keep out dev things from the final system.

jtojnar · 2023-12-10T00:13:57Z

Weirdly, python310Packages.psycopg tests fail non-deterministically (first I thought the dev commit was responsible but I have since managed to build it without errors so I am not sure):

_______________________ test_leak[asyncio-dict_row-iter] _______________________

aconn_cls = <class 'psycopg.AsyncConnection'>
dsn = 'host=/build/run/postgresql user=psycopg'
faker = <tests.fix_faker.Faker object at 0x7fffb096a680>, fetch = 'iter'
row_factory = <function dict_row at 0x7fffb34784c0>

    @pytest.mark.slow
    @pytest.mark.parametrize("fetch", ["one", "many", "all", "iter"])
    @pytest.mark.parametrize("row_factory", ["tuple_row", "dict_row", "namedtuple_row"])
    async def test_leak(aconn_cls, dsn, faker, fetch, row_factory):
        faker.choose_schema(ncols=5)
        faker.make_records(10)
        row_factory = getattr(rows, row_factory)
    
        async def work():
            async with await aconn_cls.connect(dsn) as conn, conn.transaction(
                force_rollback=True
            ):
                async with psycopg.AsyncClientCursor(conn, row_factory=row_factory) as cur:
                    await cur.execute(faker.drop_stmt)
                    await cur.execute(faker.create_stmt)
                    async with faker.find_insert_problem_async(conn):
                        await cur.executemany(faker.insert_stmt, faker.records)
                    await cur.execute(faker.select_stmt)
    
                    if fetch == "one":
                        while True:
                            tmp = await cur.fetchone()
                            if tmp is None:
                                break
                    elif fetch == "many":
                        while True:
                            tmp = await cur.fetchmany(3)
                            if not tmp:
                                break
                    elif fetch == "all":
                        await cur.fetchall()
                    elif fetch == "iter":
                        async for rec in cur:
                            pass
    
        n = []
        gc_collect()
        for i in range(3):
            await work()
            gc_collect()
            n.append(gc_count())
    
>       assert n[0] == n[1] == n[2], f"objects leaked: {n[1] - n[0]}, {n[2] - n[1]}"
E       AssertionError: objects leaked: 1, -1
E       assert 216420 == 216421

tests/test_client_cursor_async.py:680: AssertionError
=========================== short test summary info ============================
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-rows-Format.BINARY-True] - AssertionError: objects leaked: 1, -1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-rows-Format.TEXT-False] - AssertionError: objects leaked: -1, 0
FAILED tests/test_copy_async.py::test_copy_from_leaks[asyncio-Format.TEXT-False] - AssertionError: objects leaked: -1, 0
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-iter-Format.BINARY-True] - AssertionError: objects leaked: -1, 0
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-read-Format.TEXT-False] - AssertionError: objects leaked: 1, -1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-read-Format.BINARY-True] - AssertionError: objects leaked: 0, 1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-rows-Format.TEXT-True] - AssertionError: objects leaked: 0, 1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-row-Format.TEXT-False] - AssertionError: objects leaked: 1, -1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-read-Format.TEXT-True] - AssertionError: objects leaked: -1, 0
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-iter-Format.TEXT-False] - AssertionError: objects leaked: 0, 1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-row-Format.BINARY-True] - AssertionError: objects leaked: 0, 1
FAILED tests/test_copy_async.py::test_copy_to_leaks[asyncio-row-Format.TEXT-True] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.BINARY-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.BINARY-b] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.TEXT-t] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.BINARY-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-many-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-many-Format.BINARY-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-one-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-many-Format.BINARY-b] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.BINARY-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.TEXT-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-all-Format.TEXT-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.TEXT-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-one-Format.TEXT-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.TEXT-s] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.TEXT-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-many-Format.TEXT-s] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.BINARY-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-one-Format.TEXT-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.BINARY-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.BINARY-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.BINARY-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-all-Format.TEXT-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-many-Format.TEXT-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-all-Format.BINARY-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-one-Format.BINARY-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-iter-Format.TEXT-t] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-all-Format.TEXT-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-many-Format.TEXT-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-all-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-all-Format.BINARY-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-all-Format.BINARY-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-one-Format.BINARY-b] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-many-Format.TEXT-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-iter-Format.TEXT-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-all-Format.BINARY-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-one-Format.TEXT-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-many-Format.BINARY-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-many-Format.BINARY-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-one-Format.BINARY-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-one-Format.TEXT-b] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-iter-Format.BINARY-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-iter-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-iter-Format.BINARY-t] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-tuple_row-one-Format.BINARY-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-one-Format.TEXT-t] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-all-Format.BINARY-s] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-one-Format.BINARY-s] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-many-Format.TEXT-b] - AssertionError: objects leaked: 1, -1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-many-Format.BINARY-s] - AssertionError: objects leaked: 0, 1
FAILED tests/test_cursor_async.py::test_leak[asyncio-namedtuple_row-iter-Format.TEXT-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-many-Format.BINARY-t] - AssertionError: objects leaked: -1, 0
FAILED tests/test_cursor_async.py::test_leak[asyncio-dict_row-one-Format.BINARY-t] - AssertionError: objects leaked: 1, -1
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-dict_row-many] - AssertionError: objects leaked: -1, 0
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-namedtuple_row-many] - AssertionError: objects leaked: -1, 1
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-namedtuple_row-one] - AssertionError: objects leaked: -1, 0
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-tuple_row-one] - AssertionError: objects leaked: -1, 0
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-namedtuple_row-all] - AssertionError: objects leaked: 0, 1
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-namedtuple_row-iter] - AssertionError: objects leaked: 0, -1
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-tuple_row-all] - AssertionError: objects leaked: 0, 1
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-tuple_row-iter] - AssertionError: objects leaked: -1, 0
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-tuple_row-many] - AssertionError: objects leaked: -1, 0
FAILED tests/test_client_cursor_async.py::test_leak[asyncio-dict_row-iter] - AssertionError: objects leaked: 1, -1
= 76 failed, 4393 passed, 148 skipped, 78 deselected, 29 xfailed in 589.11s (0:09:49) =

SuperSandro2000 · 2023-12-10T02:04:19Z

I think we can just ignore those. There are many other tests that pass and from the description they read like they can't be that stable.

The package contains some files only necessary for linking other software against PgSQL’s libraries. Those files include compiler flags that reference `dev` outputs of other libraries, unnecessarily increasing the runtime closure. Let’s move those files to a `dev` output, reducing the runtime closure of `out`. We also need to clear out some paths hardcoded into the libs to avoid a dependency cycle between the `dev` and `out` outputs. This includes the path to PGXS files for the `libpgcommon` and `postgres` server (used e.g. by `SELECT pg_config()` query); we restore the path explicitly for `pg_config` program. The `out` output will be the root of the graph. This further reduces the closure size of out from 236.5M to 235.5M.

wolfgangwalther · 2024-08-24T12:08:58Z

Superseded by #294504

This was supposed to happen in NixOS#294504, but the commit was accidentally left out when splitting off some libpq-related changes. Originated in NixOS#179962, by Sandro. Co-authored-by: Sandro Jäckel <sandro.jaeckel@gmail.com> Co-authored-by: Wolfgang Walther <walther@technowledgy.de>

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jtojnar added 2 commits December 8, 2023 19:57

postgresql: Remove more dev output references from closure

cc2469c

No closure reduction this time since there are still more references.

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treewide: prepare for pg_config moving to dev

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python310Packages.psycopg: prepare for pg_config moving to dev

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python310Packages.psycopg2cffi: prepare for pg_config moving to dev

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php82Packages.pdo_psql: prepare for pg_config moving to dev

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wolfgangwalther mentioned this pull request Mar 9, 2024

postgresql: split -lib and -dev outputs cleanly #294504

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treewide: fix pg_config / postgresql headers moved to dev output #336994

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postgresql: Remove dev dependencies from closure #179962

postgresql: Remove dev dependencies from closure #179962

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jtojnar Dec 9, 2023

SuperSandro2000 commented Dec 9, 2023

jtojnar commented Dec 10, 2023

SuperSandro2000 commented Dec 10, 2023

wolfgangwalther commented Aug 24, 2024

postgresql: Remove dev dependencies from closure #179962

postgresql: Remove dev dependencies from closure #179962

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jtojnar commented Jul 3, 2022 • edited Loading

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jtojnar commented Jul 12, 2022

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SuperSandro2000 commented Dec 9, 2023

jtojnar commented Dec 10, 2023

SuperSandro2000 commented Dec 10, 2023

wolfgangwalther commented Aug 24, 2024

jtojnar commented Jul 3, 2022 •

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jtojnar commented Dec 8, 2023 •

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