Develop #267
Merged
Develop #267
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
* example test commit * example edit
…iments to subclasses (#184) * First commit * Second commit * Modifications * Lol * Lol * Incorporated N170 and p300, looking good for a PR * ssvep update * Implementing subclasses instead of loose functions * fix: fixed import (brainflow updated API) * Playing around still * Fixing import errors * Adding abstractmethod decorators * Still working on the import error * Guess what's finally working * Comments and naming ticks * More comments * Live coding demonstration * ssvep adapted * Adapting Auditory Oddball * changing save_fn to self.save_fun * This maybe the last big change * utils file changed, changes work through cli Co-authored-by: Erik Bjäreholt <erik@bjareho.lt>
* started pipelines function * almost working simple function equivalents of nb scripts * fix: fixed import (brainflow updated API) * sqc fixes for unicorn (#176) * Ignore pushes * Trying to create a cli * Stepping through the problem * First commit * Fixing pause in signal quality check * Fixing Signal quality check problem * fix the technical debt * Save path done for automated saving pdf * I feel amazing * Almost through * Update eegnb/cli/__main__.py Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> * Trying to create cli but it's being really painful * Extra word cli error * Changed example handling * Pain * Adding whole datapath * Finally fixed cli * hmm * Looking good * added hyperlink * Having some issues with detecting css and image deltetion * Just the css now * Fixed the css linking problem though it's a weird soln * Automated running, still fnames problem * Hahahah embedded images in html * Improving code * Okay now * Look at that * Almost there just the two figures now * Now * Added attrdict to do with cli error Co-authored-by: John Griffiths <j.davidgriffiths@gmail.com> Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com>
…me redundant lines (#209)
* fixes to get docs building by github action * reverted some changes * Update 01r__ssvep_viz.py Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com>
small commit to test doc build workflow on this branch
* major update: merging develop to master (#217) * example test commit (#182) * example test commit * example edit * ci: run test workflow on develop branch * ci: add develop branch to job triggers * ci: fix syntax issue in workflow * fix: fixed import (brainflow updated API) * build(deps): locked pylsl==1.10.5 (#187) * Experiment Class Refactor (update to #183), converting specific experiments to subclasses (#184) * First commit * Second commit * Modifications * Lol * Lol * Incorporated N170 and p300, looking good for a PR * ssvep update * Implementing subclasses instead of loose functions * fix: fixed import (brainflow updated API) * Playing around still * Fixing import errors * Adding abstractmethod decorators * Still working on the import error * Guess what's finally working * Comments and naming ticks * More comments * Live coding demonstration * ssvep adapted * Adapting Auditory Oddball * changing save_fn to self.save_fun * This maybe the last big change * utils file changed, changes work through cli Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> * Submodule added for gsoc * Adding pipelines for cli analysis (#202) * started pipelines function * almost working simple function equivalents of nb scripts * fix: fixed import (brainflow updated API) * sqc fixes for unicorn (#176) * Ignore pushes * Trying to create a cli * Stepping through the problem * First commit * Fixing pause in signal quality check * Fixing Signal quality check problem * fix the technical debt * Save path done for automated saving pdf * I feel amazing * Almost through * Update eegnb/cli/__main__.py Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> * Trying to create cli but it's being really painful * Extra word cli error * Changed example handling * Pain * Adding whole datapath * Finally fixed cli * hmm * Looking good * added hyperlink * Having some issues with detecting css and image deltetion * Just the css now * Fixed the css linking problem though it's a weird soln * Automated running, still fnames problem * Hahahah embedded images in html * Improving code * Okay now * Look at that * Almost there just the two figures now * Now * Added attrdict to do with cli error Co-authored-by: John Griffiths <j.davidgriffiths@gmail.com> Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> * added more options for site args; improved function names; removed some redundant lines (#209) * fix subject num parsing bug * analysis report function improvements for openbci cyton and gtec unicorn devices * run exp fix * Update requirements.txt * fixes to get docs building by github action (#210) * fixes to get docs building by github action * reverted some changes * Update 01r__ssvep_viz.py Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> * Update README.rst small commit to test doc build workflow on this branch * removing gsoc submodule Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: Parv Agarwal <65726543+Parvfect@users.noreply.github.com> Co-authored-by: Parvfect <parvagrw02@gmail.com> Co-authored-by: Ben Pettit <pelleter@gmail.com> * update dependencies - seaborn * docs/perf: reduced the imports: `cueing` example * bug: update deprecated `plot_psd()` method - feature of new `mne` version. - instead of doing plot_psd() from the `mne.io.Raw` object, must do this: - `raw.compute_psd().plot()` - i.e., has to pass through a `spectrum` object * updated deprec. `mne` function * perf: removed importage of unused packages from example - One of them, i.e., `collections.Iterable` is even deprecated. - Must use `collections.abc.Iterable` instead now. - Resulting in faster build/user run * bugfix: `plot_conditions` - due to `sns` deprecation * bugfix: resolved `psd_welch()` deprecation (`mne`) --------- Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: Parv Agarwal <65726543+Parvfect@users.noreply.github.com> Co-authored-by: Parvfect <parvagrw02@gmail.com> Co-authored-by: Ben Pettit <pelleter@gmail.com> Co-authored-by: Taha Morshedzadeh <taha.morshedzadeh@neuromatch.io>
* update psychopy for psychxr compatibility * updated n170 example to run again.
…Refactor (#218) * major update: merging develop to master (#217) * example test commit (#182) * example test commit * example edit * ci: run test workflow on develop branch * ci: add develop branch to job triggers * ci: fix syntax issue in workflow * fix: fixed import (brainflow updated API) * build(deps): locked pylsl==1.10.5 (#187) * Experiment Class Refactor (update to #183), converting specific experiments to subclasses (#184) * First commit * Second commit * Modifications * Lol * Lol * Incorporated N170 and p300, looking good for a PR * ssvep update * Implementing subclasses instead of loose functions * fix: fixed import (brainflow updated API) * Playing around still * Fixing import errors * Adding abstractmethod decorators * Still working on the import error * Guess what's finally working * Comments and naming ticks * More comments * Live coding demonstration * ssvep adapted * Adapting Auditory Oddball * changing save_fn to self.save_fun * This maybe the last big change * utils file changed, changes work through cli Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> * Submodule added for gsoc * Adding pipelines for cli analysis (#202) * started pipelines function * almost working simple function equivalents of nb scripts * fix: fixed import (brainflow updated API) * sqc fixes for unicorn (#176) * Ignore pushes * Trying to create a cli * Stepping through the problem * First commit * Fixing pause in signal quality check * Fixing Signal quality check problem * fix the technical debt * Save path done for automated saving pdf * I feel amazing * Almost through * Update eegnb/cli/__main__.py Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> * Trying to create cli but it's being really painful * Extra word cli error * Changed example handling * Pain * Adding whole datapath * Finally fixed cli * hmm * Looking good * added hyperlink * Having some issues with detecting css and image deltetion * Just the css now * Fixed the css linking problem though it's a weird soln * Automated running, still fnames problem * Hahahah embedded images in html * Improving code * Okay now * Look at that * Almost there just the two figures now * Now * Added attrdict to do with cli error Co-authored-by: John Griffiths <j.davidgriffiths@gmail.com> Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> * added more options for site args; improved function names; removed some redundant lines (#209) * fix subject num parsing bug * analysis report function improvements for openbci cyton and gtec unicorn devices * run exp fix * Update requirements.txt * fixes to get docs building by github action (#210) * fixes to get docs building by github action * reverted some changes * Update 01r__ssvep_viz.py Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> * Update README.rst small commit to test doc build workflow on this branch * removing gsoc submodule Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: Parv Agarwal <65726543+Parvfect@users.noreply.github.com> Co-authored-by: Parvfect <parvagrw02@gmail.com> Co-authored-by: Ben Pettit <pelleter@gmail.com> * Updated doc examples * Update 00x__n170_run_experiment.py fix: typo in func param --------- Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com> Co-authored-by: Erik Bjäreholt <erik@bjareho.lt> Co-authored-by: Ben Pettit <pelleter@gmail.com> Co-authored-by: Ore O <oreogundipe@gmail.com>
ci: update Python to 3.8, update wxPython
* Revert "Revert PR #167: "ci: fix broken CI" (#169)" This reverts commit 2d74871. * Update Makefile * fix: Update vep.py import * Update Makefile * Update vep.py * fix: typo in makefile * fix: update BaseExperiment class reference * Update Makefile * Update vep.py * Update 01r__n170_viz.py * makefile: install libnotify4 --------- Co-authored-by: Ore O <oreogundipe@gmail.com>
* fixed plot_conditions functoni issues * small change to viz n170 plotting example * small change to viz p300 plotting example * fixed to plotting issue * modify plot command * update example files * fix condition label bug * fix: set layout engine to fix colorbar error --------- Co-authored-by: Ore O <oreogundipe@gmail.com>
* started renaming from eegnb to eegexpy * more eegnb renaming work * more eegnb switches * more relabelling * ssvep renamings * cueing eg * update for more misc files * more of the same * update * Update and rename available_notebooks.md to available_experiments.md
* Add files via upload * Update README.rst
* added newly separated analysis and streaming utils files * modified setup and requirements to allow for optional install types * updated imports in experiment examples * fixed some typos * Update requirements.txt moved click library to stim pres requirements section * Update requirements.txt Co-authored-by: Taha Morshedzadeh <t.morshedzadeh@mail.utoronto.ca> * Update Makefile * Update docs.yml * Update Makefile this does a full build with all dependencies for EEG-ExPy --------- Co-authored-by: Ore O <oreogundipe@gmail.com> Co-authored-by: Taha Morshedzadeh <t.morshedzadeh@mail.utoronto.ca>
* feat: update action to build doc page in a folder * test: see if it works without if clause * test: change source for docs
* fixed requirements.txt so 'pip install -e .' would work on windows. * added support for n170 to run on rift * altered logic to add back in jitter * simplified logic * made fullscreen again * further simplified logic * decreased font size of instructions for vr * fixed instructions display, further simplified logic, removed logs * made code easier to read * reverted board back to muse * Enable headlocking to fix jittering - cancel out any rotation and translation coming from the headset. * fixed use_vr parameter to be set to False by default for existing experiments. * fix macos build * reverted unnecessary changes and made p300 experiment display correctly * added vr support for p300 and ssvep * fix psychxr version * adding vr doc * updated vr doco --------- Co-authored-by: John Griffiths <JohnGriffiths@users.noreply.github.com>
* fixed duration on instructions screen * put sound object instantiation inside trials loop. fixes sound fading issue
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
implementing regular update.