Support for finetuning and finetuning inference with .ckpt files & ba…

…tch size refactoring (#5339) (#5478) * Initial refactor Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Resolve config before passing to load_from_checkpoint Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Fixes for model parallel and nemo restore Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Fixes for eval Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Revert config changes Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Refactor Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Fix typo Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Remove comments Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Minor Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Fix validation reconfiguration Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * Remove old comment Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci * Fixes for test_ds Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> * [pre-commit.ci] auto fixes from pre-commit.com hooks for more information, see https://pre-commit.ci Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com> Signed-off-by: MaximumEntropy <sandeep.subramanian.1@umontreal.ca> Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
NVIDIA · Nov 22, 2022 · 959bddf · 959bddf
1 parent 4a523ad
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Showing 9 changed files with 283 additions and 194 deletions.
diff --git a/examples/nlp/language_modeling/conf/megatron_t0_config.yaml b/examples/nlp/language_modeling/conf/megatron_t0_config.yaml
@@ -36,7 +36,11 @@ exp_manager:
     save_best_model: True
 
 model:
-  restore_from_path: ??? # Path to a trained T5 or LM-adapted T5 .nemo file
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   tensor_model_parallel_size: 1
   pipeline_model_parallel_size: 1
   pipeline_model_parallel_split_rank: 0
@@ -78,6 +82,10 @@ model:
         name: "exact_string_match" # Name of the evaluation metric to use.
         average: null # Average the metric over the dataset. Options: ['macro', 'micro']. Works only for 'F1', 'accuracy' etc. Refer to torchmetrics for metrics where this is supported.
         num_classes: null
+      replace_bos_with_pad: ${data.train_ds.replace_bos_with_pad}
+      add_bos_to_input: ${data.train_ds.add_bos_to_input}
+      add_eos_to_input: ${data.train_ds.add_eos_to_input}
+      seed: 1234
 
   optim:
     name: fused_adam

diff --git a/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_eval.yaml b/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_eval.yaml
@@ -17,7 +17,11 @@ exp_manager:
   create_checkpoint_callback: False
 
 model:
-  restore_from_path: ??? # Path to a finetuned T5 .nemo file
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   gradient_as_bucket_view: True # Allocate gradients in a contiguous bucket to save memory (less fragmentation and buffer memory)
   megatron_amp_O2: False # Enable O2 optimization for megatron amp
 

diff --git a/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_eval.yaml b/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_eval.yaml
@@ -17,9 +17,16 @@ exp_manager:
   create_checkpoint_callback: False
 
 model:
-  restore_from_path: ??? # Path to a finetuned T5 .nemo file
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   gradient_as_bucket_view: True # Allocate gradients in a contiguous bucket to save memory (less fragmentation and buffer memory)
   megatron_amp_O2: False # Enable O2 optimization for megatron amp
+  tensor_model_parallel_size: 1
+  pipeline_model_parallel_size: 1
+  pipeline_model_parallel_split_rank: 0
 
   data:
     validation_ds:

diff --git a/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_mnli.yaml b/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_mnli.yaml
@@ -37,7 +37,11 @@ exp_manager:
     save_best_model: True
 
 model:
-  restore_from_path: ??? # Path to a trained T5 .nemo file
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   tensor_model_parallel_size: 1
   pipeline_model_parallel_size: 1
   pipeline_model_parallel_split_rank: 0

diff --git a/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_xnli.yaml b/examples/nlp/language_modeling/conf/megatron_t5_config_finetune_glue_xnli.yaml
@@ -37,9 +37,13 @@ exp_manager:
     save_best_model: True
 
 model:
-  restore_from_path: ???
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   tensor_model_parallel_size: 1
-  pipeline_model_parallel_size: 2
+  pipeline_model_parallel_size: 1
   pipeline_model_parallel_split_rank: 1
   gradient_as_bucket_view: True # Allocate gradients in a contiguous bucket to save memory (less fragmentation and buffer memory)
   resume_from_checkpoint: null

diff --git a/examples/nlp/language_modeling/conf/megatron_t5_finetune.yaml b/examples/nlp/language_modeling/conf/megatron_t5_finetune.yaml
@@ -36,7 +36,11 @@ exp_manager:
     save_best_model: True
 
 model:
-  restore_from_path: ??? # Path to a trained T5 .nemo file
+  restore_from_path: null # Path to a trained T5 .nemo file
+  pretrained_checkpoint:
+    checkpoint_dir: null # Path to a folder that contains a .ckpt file
+    checkpoint_name: null # Name of the .ckpt file within the checkpoint_dir.
+    hparams_file: null # Path to a .yaml file that contains the hyperparameters of the checkpoint.
   tensor_model_parallel_size: 1
   pipeline_model_parallel_size: 1
   pipeline_model_parallel_split_rank: 0

diff --git a/examples/nlp/language_modeling/megatron_t5_seq2seq_eval.py b/examples/nlp/language_modeling/megatron_t5_seq2seq_eval.py
@@ -12,6 +12,7 @@
 # See the License for the specific language governing permissions and
 # limitations under the License.
 
+from megatron_t5_seq2seq_finetune import load_from_checkpoint_dir, load_from_nemo, validate_checkpoint_loading_args
 from omegaconf.omegaconf import OmegaConf, open_dict
 from pytorch_lightning import Trainer
 from pytorch_lightning.callbacks.timer import Timer
@@ -21,17 +22,51 @@
 from nemo.collections.nlp.models.language_modeling.megatron_finetune_model import MegatronT5FinetuneModel
 from nemo.collections.nlp.models.language_modeling.megatron_glue_model import MegatronT5GLUEModel
 from nemo.collections.nlp.models.language_modeling.megatron_t0_model import MegatronT0Model
-from nemo.collections.nlp.parts.nlp_overrides import (
-    GradScaler,
-    MegatronHalfPrecisionPlugin,
-    NLPDDPStrategy,
-    NLPSaveRestoreConnector,
-)
+from nemo.collections.nlp.parts.nlp_overrides import GradScaler, MegatronHalfPrecisionPlugin, NLPDDPStrategy
 from nemo.core.config import hydra_runner
 from nemo.utils import logging
 from nemo.utils.exp_manager import StatelessTimer, exp_manager
 
 
+def _modify_config(t5_cfg, cfg, add_cfg_to_tree=False):
+    """
+    This function modifies the original t5 pre-training config (t5_cfg) with attributes from the finetuning config (cfg).
+    The `add_cfg_to_tree` arg adds `cfg` to the top of the yaml tree which is needed for all `hparams.yaml` files when passed as an arg to `load_from_checkpoint()`.
+    """
+    OmegaConf.set_struct(t5_cfg, True)
+    with open_dict(t5_cfg):
+        t5_cfg.precision = cfg.trainer.precision
+        # Overwrite data configs
+        if cfg.model.data.validation_ds.get('src_file_name', None) is not None:
+            logging.info(
+                'Found validation_ds.src_file_name in the config file. Overriding the finetuned model config file with the values from the new config file.'
+            )
+            t5_cfg.data.validation_ds.src_file_name = cfg.model.data.validation_ds.src_file_name
+        if cfg.model.data.validation_ds.get('tgt_file_name', None) is not None:
+            logging.info(
+                'Found validation_ds.tgt_file_name in the config file. Overriding the finetuned model config file with the values from the new config file.'
+            )
+            t5_cfg.data.validation_ds.tgt_file_name = cfg.model.data.validation_ds.tgt_file_name
+
+        if "write_predictions_to_file" in cfg.model.data.validation_ds:
+            t5_cfg.data.validation_ds.write_predictions_to_file = (
+                cfg.model.data.validation_ds.write_predictions_to_file
+            )
+        if "output_file_path_prefix" in cfg.model.data.validation_ds:
+            t5_cfg.data.validation_ds.output_file_path_prefix = cfg.model.data.validation_ds.output_file_path_prefix
+
+        t5_cfg.data.validation_ds.micro_batch_size = cfg.model.data.validation_ds.micro_batch_size
+        t5_cfg.data.validation_ds.global_batch_size = cfg.model.data.validation_ds.global_batch_size
+
+        # This is needed when modifying a hparam file directly to load `.ckpt` files.
+        # This is not needed to modify the cfg in `.nemo` files.
+        if add_cfg_to_tree:
+            OmegaConf.resolve(t5_cfg)
+            t5_cfg.cfg = t5_cfg
+
+    return t5_cfg
+
+
 @hydra_runner(config_path="conf", config_name="megatron_t5_config_finetune_glue_eval")
 def main(cfg) -> None:
     logging.info("\n\n************** Experiment configuration ***********")
@@ -69,59 +104,33 @@ def main(cfg) -> None:
         if isinstance(callback, Timer):
             trainer.callbacks[idx] = StatelessTimer(cfg.trainer.max_time,)
 
-    t5_cfg = MegatronT5GLUEModel.restore_from(
-        restore_path=cfg.model.restore_from_path, trainer=trainer, return_config=True
-    )
-
-    # Override the T5 configuration with the one from the config file.
-    # NOTE: Only data can be overriden here since this the file being restored here should already correspond to a GLUE/XNLI finetuned model.
-    OmegaConf.set_struct(t5_cfg, True)
-    with open_dict(t5_cfg):
-        t5_cfg.precision = cfg.trainer.precision
-        # Overwrite data configs
-        if cfg.model.data.validation_ds.get('src_file_name', None) is not None:
-            logging.info(
-                'Found validation_ds.src_file_name in the config file. Overriding the finetuned model config file with the values from the new config file.'
+    if hasattr(cfg.model.data.validation_ds, 'task_name'):
+        if cfg.model.restore_from_path:
+            t5_cfg = MegatronT5GLUEModel.restore_from(
+                restore_path=cfg.model.restore_from_path, trainer=trainer, return_config=True
             )
-            t5_cfg.data.validation_ds.src_file_name = cfg.model.data.validation_ds.src_file_name
-        if cfg.model.data.validation_ds.get('tgt_file_name', None) is not None:
-            logging.info(
-                'Found validation_ds.tgt_file_name in the config file. Overriding the finetuned model config file with the values from the new config file.'
-            )
-            t5_cfg.data.validation_ds.tgt_file_name = cfg.model.data.validation_ds.tgt_file_name
-
-        if "write_predictions_to_file" in cfg.model.data.validation_ds:
-            t5_cfg.data.validation_ds.write_predictions_to_file = (
-                cfg.model.data.validation_ds.write_predictions_to_file
-            )
-        if "output_file_path_prefix" in cfg.model.data.validation_ds:
-            t5_cfg.data.validation_ds.output_file_path_prefix = cfg.model.data.validation_ds.output_file_path_prefix
-            t5_cfg.data.validation_ds.src_file_name = cfg.model.data.validation_ds.src_file_name
-
-        t5_cfg.data.validation_ds.micro_batch_size = cfg.model.data.validation_ds.micro_batch_size
-        t5_cfg.data.validation_ds.global_batch_size = cfg.model.data.validation_ds.global_batch_size
-
-        if hasattr(cfg.model.data.validation_ds, 'task_name'):
-            model = MegatronT5GLUEModel.restore_from(
-                restore_path=cfg.model.restore_from_path,
-                trainer=trainer,
-                override_config_path=t5_cfg,
-                save_restore_connector=NLPSaveRestoreConnector(),
-            )
-        elif hasattr(cfg.model.data.validation_ds, 'file_names'):
-            model = MegatronT0Model.restore_from(
-                restore_path=cfg.model.restore_from_path,
-                trainer=trainer,
-                override_config_path=t5_cfg,
-                save_restore_connector=NLPSaveRestoreConnector(),
+            model = load_from_nemo(MegatronT5GLUEModel, cfg, trainer, t5_cfg, modify_confg_fn=_modify_config)
+        else:
+            validate_checkpoint_loading_args(cfg.model.pretrained_checkpoint)
+            model = load_from_checkpoint_dir(MegatronT5GLUEModel, cfg, trainer, modify_confg_fn=_modify_config)
+    elif hasattr(cfg.model.data.validation_ds, 'file_names'):
+        if cfg.model.restore_from_path:
+            t5_cfg = MegatronT0Model.restore_from(
+                restore_path=cfg.model.restore_from_path, trainer=trainer, return_config=True
             )
+            model = load_from_nemo(MegatronT0Model, cfg, trainer, t5_cfg, modify_confg_fn=_modify_config)
         else:
-            model = MegatronT5FinetuneModel.restore_from(
-                restore_path=cfg.model.restore_from_path,
-                trainer=trainer,
-                override_config_path=t5_cfg,
-                save_restore_connector=NLPSaveRestoreConnector(),
+            validate_checkpoint_loading_args(cfg.model.pretrained_checkpoint)
+            model = load_from_checkpoint_dir(MegatronT0Model, cfg, trainer, modify_confg_fn=_modify_config)
+    else:
+        if cfg.model.restore_from_path:
+            t5_cfg = MegatronT5FinetuneModel.restore_from(
+                restore_path=cfg.model.restore_from_path, trainer=trainer, return_config=True
             )
+            model = load_from_nemo(MegatronT5FinetuneModel, cfg, trainer, modify_confg_fn=_modify_config)
+        else:
+            validate_checkpoint_loading_args(cfg.model.pretrained_checkpoint)
+            model = load_from_checkpoint_dir(MegatronT5FinetuneModel, cfg, trainer, modify_confg_fn=_modify_config)
 
     model.freeze()
     trainer.validate(model)