Developer Documents for mcore RETRO (#9026)

* update branch

Signed-off-by: eharper <eharper@nvidia.com>

* Add dist ckpt support for regular optimizers (#7749)

* Add dist ckpt support for regular optimizers

Signed-off-by: Mikołaj Błaż <mblaz@nvidia.com>

* [tutorial] fixed missing RIR scripts file. (#8257)

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>

* fix imports

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* imports fix

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* ci imports fix

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* revert asr notebook

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* revert asr notebook

Signed-off-by: dimapihtar <dpihtar@gmail.com>

---------

Signed-off-by: Mikołaj Błaż <mblaz@nvidia.com>
Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Signed-off-by: dimapihtar <dpihtar@gmail.com>
Co-authored-by: Eric Harper <complex451@gmail.com>
Co-authored-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Co-authored-by: Dmytro Pykhtar <37850217+dimapihtar@users.noreply.github.com>
Co-authored-by: dimapihtar <dpihtar@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Pin lhotse=1.19.2 in r1.23.0 (#8303)

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Cache Aware Streaming tutorial notebook (#8296)

* add notebook

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* rename old notebook to Buffered_Streaming

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* call setup_streaming_params in set_default_att_context_size method

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* update links in docs

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* update links to tutorials in docs

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* remove hard-coding

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* rename var

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

---------

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* fix path location and branch (#8304)

* fix path location and branch

Signed-off-by: Nithin Rao Koluguri <nithinraok>

* change to a floating point number

Signed-off-by: Nithin Rao Koluguri <nithinraok>

---------

Signed-off-by: Nithin Rao Koluguri <nithinraok>
Co-authored-by: Nithin Rao Koluguri <nithinraok>
Co-authored-by: Somshubra Majumdar <titu1994@gmail.com>

* add deallocate pipeline output optimization (#8279)

* add deallocate pipeline output optimization

Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>
Co-authored-by: Jimmy Zhang <jiemingz@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Fix memory leak caused by context parallelism hanging references by omegaconf (#8299)

* save cp_size to self

Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>

* use parallel_state instead of self

Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>

---------

Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>
Co-authored-by: Jimmy Zhang <jiemingz@nvidia.com>
Co-authored-by: Eric Harper <complex451@gmail.com>

* remove assertion (#8302)

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* Update PEFT Doc (#8262)

* update peft doc

Signed-off-by: Chen Cui <chcui@nvidia.com>

* remove old prompt learning doc and notebook

Signed-off-by: Chen Cui <chcui@nvidia.com>

* fix table

Signed-off-by: Chen Cui <chcui@nvidia.com>

* fix table

Signed-off-by: Chen Cui <chcui@nvidia.com>

* fix table

Signed-off-by: Chen Cui <chcui@nvidia.com>

* Merge branch 'r1.23.0' into chcui/update_peft_doc

Signed-off-by: Chen Cui <chcui@nvidia.com>

* revert accidental changes

Signed-off-by: Chen Cui <chcui@nvidia.com>

* revert accidental changes

Signed-off-by: Chen Cui <chcui@nvidia.com>

---------

Signed-off-by: Chen Cui <chcui@nvidia.com>

* Attention encoder-decoder models for multiple speech-to-text tasks  (#8242) (#8324)

* Rebasing canary changes at current main

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Move the changes from asr transformer to nlp transformer as originally intended

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* update eval to strip spaces before punctuations

Signed-off-by: stevehuang52 <heh@nvidia.com>

* update pc strip

Signed-off-by: stevehuang52 <heh@nvidia.com>

* [canary] Refactor: `PromptedAudioToTextLhotseDataset` and `EncDecMultiTaskModel` (#8247)

* Create a separate CanaryDataset and use it inside `transformer_bpe_models.py`. Ditches `token_sequence_format`.

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* [canary] Refactor: move changes in transformer_bpe_models.py to Canar… (#8252)

* [canary] Refactor: move changes in transformer_bpe_models.py to CanaryModel

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Rename `CanaryModel` to `EncDecMultiTaskModel` and remove inheritance from `EncDecTransfModelBPE`; add a separate config for this model

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

---------

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Rename `CanaryDataset` to `PromptedAudioToTextLhotseDataset`; add `prompt_format_fn` argument; clean-up the `_canary_prompt_format` function a bit

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Move tokenization into `prompt_format_fn`, fix usage, add docs

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Backward-compatible utterance validation

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Improve type annotations

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* config and prompt_fn registration changes from review

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

---------

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* fix transcribe config

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Refactor Canary to follow schema of remaining ASR models (#8260)

* Initial draft of multi task beam decoding strategy

Signed-off-by: smajumdar <titu1994@gmail.com>

* Stabilize inference

Signed-off-by: smajumdar <titu1994@gmail.com>

* Update AED Multi Task model to mostly conform to Archetype-Type format. Update config

Signed-off-by: smajumdar <titu1994@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add change decoding strategy

Signed-off-by: smajumdar <titu1994@gmail.com>

* Remove redundant imports

Signed-off-by: smajumdar <titu1994@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Cleanup

Signed-off-by: smajumdar <titu1994@gmail.com>

* Cleanup

Signed-off-by: smajumdar <titu1994@gmail.com>

* remove asr transformer dependency on nlp

Signed-off-by: stevehuang52 <heh@nvidia.com>

* clean up

Signed-off-by: stevehuang52 <heh@nvidia.com>

* copy token_classifier from nlp to asr

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Address comments

Signed-off-by: smajumdar <titu1994@gmail.com>

* Add typing to beam decoding

Signed-off-by: smajumdar <titu1994@gmail.com>

* Make prompt format configurable

Signed-off-by: smajumdar <titu1994@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* drop asr dependency on nlp

Signed-off-by: stevehuang52 <heh@nvidia.com>

---------

Signed-off-by: smajumdar <titu1994@gmail.com>
Signed-off-by: stevehuang52 <heh@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: stevehuang52 <heh@nvidia.com>

* fix transcribe, update asr evaluator

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Extend the docs for the canary prompt_fn

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Incorporate changes from Nithin's code review

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* training bug fix and adding launch script for speech_multitask (#8270)

* bug fix and adding launch script for speech_multitask

Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>

* update launch script example in speech_to_text_aed.py

Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>

---------

Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: Krishna Puvvada <kpuvvada@nvidia.com>

* Fix: drop_last must be true in validation/test otherwise the training will hang

Signed-off-by: Piotr Żelasko <pzelasko@nvidia.com>

* revert to current transcribe API

Signed-off-by: stevehuang52 <heh@nvidia.com>

* revert changes to NLP, update docs

Signed-off-by: stevehuang52 <heh@nvidia.com>

* update eval utils

Signed-off-by: stevehuang52 <heh@nvidia.com>

* update docs

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Remove DALI; rename compute_audio_loss to compute_loss

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* set default use_model_transcribe=False

Signed-off-by: stevehuang52 <heh@nvidia.com>

* change os.path.dirname to pathlib

Signed-off-by: stevehuang52 <heh@nvidia.com>

* [canary] Test for CanaryTokenizer + refactoring (#8285)

* Test for CanaryTokenizer

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Attempt at refactor...

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

---------

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Update config for AED models (#8294)

Signed-off-by: smajumdar <titu1994@gmail.com>

* set default calculate_wer=False in transcribe_speech.py

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Attention encoder-decoder models for multiple speech-to-text tasks

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Apply suggestions from code review, part 1

Co-authored-by: Nithin Rao <nithinrao.koluguri@gmail.com>
Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Apply suggestions from code review, part 2

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* Document compute_loss

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

* update transcribe_speech.py

Signed-off-by: stevehuang52 <heh@nvidia.com>

* add docstring

Signed-off-by: stevehuang52 <heh@nvidia.com>

* Attention encoder-decoder models for multiple speech-to-text tasks

Signed-off-by: Piotr Żelasko <petezor@gmail.com>

---------

Signed-off-by: Piotr Żelasko <petezor@gmail.com>
Signed-off-by: stevehuang52 <heh@nvidia.com>
Signed-off-by: smajumdar <titu1994@gmail.com>
Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>
Signed-off-by: Piotr Żelasko <pzelasko@nvidia.com>
Co-authored-by: stevehuang52 <heh@nvidia.com>
Co-authored-by: Somshubra Majumdar <titu1994@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Krishna Puvvada <93558329+krishnacpuvvada@users.noreply.github.com>
Co-authored-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: He Huang (Steve) <105218074+stevehuang52@users.noreply.github.com>
Co-authored-by: Nithin Rao <nithinrao.koluguri@gmail.com>
(cherry picked from commit d10726d)

Co-authored-by: Piotr Żelasko <petezor@gmail.com>

* add code for calling mcore_retro in NeMo

* add code for calling mcore_retro in NeMo

* runnable, training curve match retro mcore and nemo

* working on retro inference

* working on megatron_retro_eval.py and megatron_retro_inference.yaml

* refactoring text_generation_utils code and retro inference relevant files

* clean PR

* resolving quick hacks (reading number of train/valid samples from workdir, discrepancy in total samples and samples with neighbors retrieved, tokenizers)

* clean repository

* revert changes to inference/eval code to original in main

* clean code

* runable training code, with already implemented eval code

* [tutorial] fixed missing RIR scripts file. (#8257)

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>

* add values to en tts dict (#7879)

Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>

* Add Bert HF checkpoint converter (#8088)

* Add Bert HF checkpoint converter

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Reformat

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Add BERT ONNX export

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add NeMo BERT to HF BERT script

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Clean code

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update argument names

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Update build_transformer_config in Bert

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

---------

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Bobby Chen <bobchen@nvidia.com>

* revert to original eval code files

* revert to original eval code files 2

* revert to original eval code files 3

* revert to original eval code files 4

* clean code

* clean code

* update my code to support changes from lastest main

* commit before rebase r1.23.0

* Multimodal r1.23.0 bug fix  (#8315)

* Rename quick-gelu

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* ddpm config guard

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Fix ddpm edit api

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Fix insert_image_token cfg issue

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* neva updates

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* reformat

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Add back jenkins

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix jenkins

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Fix bugs

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Update default neva template

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

---------

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Co-authored-by: Eric Harper <complex451@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* copy paste files from r1.23.0

* clean PR

* Fixes for MoE parameter passing & use of AutoTokenizer/Model for mistral. (#8272)

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* Keep max_seqlen and cu_seqlens_argmin for later micro-batches when PP>1 (#8334)

Signed-off-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Eric Harper <complex451@gmail.com>

* Remove asr webapp (#8347)

Signed-off-by: smajumdar <titu1994@gmail.com>

* remove _target_ at model level in aed config (#8351)

Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: Krishna Puvvada <kpuvvada@nvidia.com>

* revert changes for tts and asr

* Add change_vocabulary and save_tokenizers() support to Multitask ASR models (#8357)

* Add change_vocabulary and save_tokenizers() support

Signed-off-by: smajumdar <titu1994@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update nemo/collections/asr/models/aed_multitask_models.py

Co-authored-by: Piotr Żelasko <petezor@gmail.com>
Signed-off-by: Somshubra Majumdar <titu1994@gmail.com>

---------

Signed-off-by: smajumdar <titu1994@gmail.com>
Signed-off-by: Somshubra Majumdar <titu1994@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Piotr Żelasko <petezor@gmail.com>

* Change default (#8371)

Signed-off-by: smajumdar <titu1994@gmail.com>

* implement retro's own fwd_bwd_step() and validation_step() to not have argument first_val_step, which the MLM commit doesn't support

* adding megatron compile_helpers(), in future can be fixed with correct MLM commit

* bug fix in fast-conformer-aed.yaml and adding jenkins test for speech_to_text_aed model (#8368)

Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: Somshubra Majumdar <titu1994@gmail.com>

* Enable megatron core loggers for GPT pretraining (#8354)

* Logging changes tested for gpt_pretraining

Signed-off-by: Aishwarya Bhandare <abhandare@nvidia.com>

* Additional args

Signed-off-by: Aishwarya Bhandare <abhandare@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Aishwarya Bhandare <abhandare@nvidia.com>
Co-authored-by: Aishwarya Bhandare <abhandare@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Eric Harper <complex451@gmail.com>

* mcore ds fix (#8283)

* [tutorial] fixed missing RIR scripts file. (#8257)

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>

* add values to en tts dict (#7879)

Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>

* mcore ds fix

Signed-off-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update mcore

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* revert asr files

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* add comments

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* add support for mcore mock dataset

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update mcore version

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update gpt cfg

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update mcore commit

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix Bert unit tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update bert tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix bert mcore test

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix gpt jenkins tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update apex & TE commits

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* revert apex installation

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* turn off the fusion for jenkins

Signed-off-by: dimapihtar <dpihtar@gmail.com>

---------

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>
Signed-off-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Signed-off-by: dimapihtar <dpihtar@gmail.com>
Co-authored-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Co-authored-by: Mariana <47233618+mgrafu@users.noreply.github.com>
Co-authored-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Pablo Garay <palenq@gmail.com>

* addressing Eric's reviews

* adding existing implementation RETRO files

* adding existing implementation RETRO files

* Add Finetuning tutorial with HF Datasets (#8356)

* Add Finetuning tutorial with HF Datasets

Signed-off-by: Nithin Rao Koluguri <nithinraok>

* update on Som comments

Signed-off-by: Nithin Rao Koluguri <nithinraok>

---------

Signed-off-by: Nithin Rao Koluguri <nithinraok>
Co-authored-by: Nithin Rao Koluguri <nithinraok>

* release updates (#8378)

* [tutorial] fixed missing RIR scripts file. (#8257)

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>

* add values to en tts dict (#7879)

Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>

* mcore ds fix

Signed-off-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update mcore

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* revert asr files

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* add comments

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* add support for mcore mock dataset

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update mcore version

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* update gpt cfg

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update mcore commit

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix Bert unit tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* update bert tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix bert mcore test

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* fix gpt jenkins tests

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* add support for dict data input type

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* add mock ds test

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* add test for dict data input type

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* mcore ds fix

Signed-off-by: dimapihtar <dpihtar@gmail.com>

* data input fix

Signed-off-by: dimapihtar <dpihtar@gmail.com>

---------

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>
Signed-off-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Signed-off-by: dimapihtar <dpihtar@gmail.com>
Signed-off-by: Dmytro Pykhtar <37850217+dimapihtar@users.noreply.github.com>
Co-authored-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Co-authored-by: Mariana <47233618+mgrafu@users.noreply.github.com>
Co-authored-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Pablo Garay <palenq@gmail.com>

* MCore dataset compatibility for tokenizers (#8390)

* Add unique_identifiers for all tokenizers and eod for SentencePieceTokenizer

Signed-off-by: Valerie Sarge <vsarge@nvidia.com>

* Add generalized token aliases to TokenizerSpec to conform with MegatronTokenizer's interface. Remove now-redundant individual fixes from AutoTokenizer and SentencePieceTokenizer.

Signed-off-by: Valerie Sarge <vsarge@nvidia.com>

---------

Signed-off-by: Valerie Sarge <vsarge@nvidia.com>
Co-authored-by: Pablo Garay <palenq@gmail.com>

* Mcore customization doc (#8298)

* [tutorial] fixed missing RIR scripts file. (#8257)

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>

* add values to en tts dict (#7879)

Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>

* Add Bert HF checkpoint converter (#8088)

* Add Bert HF checkpoint converter

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Reformat

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Add BERT ONNX export

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Add NeMo BERT to HF BERT script

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Clean code

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* Update argument names

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Update build_transformer_config in Bert

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

---------

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Bobby Chen <bobchen@nvidia.com>

* initial placeholder

Signed-off-by: Huiying Li <huiyingl@nvidia.com>

* add to intro/index.rst

Signed-off-by: Huiying Li <huiyingl@nvidia.com>

* initial content update

Signed-off-by: Huiying Li <willwin.lee@gmail.com>

* add diff images

Signed-off-by: Huiying Li <willwin.lee@gmail.com>

size

Signed-off-by: Huiying Li <willwin.lee@gmail.com>

* minor fixes

* minor language change

Signed-off-by: Chen Cui <chcui@nvidia.com>

* clean changes

---------

Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>
Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Signed-off-by: Huiying Li <huiyingl@nvidia.com>
Signed-off-by: Huiying Li <willwin.lee@gmail.com>
Signed-off-by: Chen Cui <chcui@nvidia.com>
Co-authored-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Co-authored-by: Mariana <47233618+mgrafu@users.noreply.github.com>
Co-authored-by: yaoyu-33 <54727607+yaoyu-33@users.noreply.github.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Bobby Chen <bobchen@nvidia.com>
Co-authored-by: Huiying Li <huiyingl@nvidia.com>
Co-authored-by: Chen Cui <chcui@nvidia.com>

* wer fix (#8404)

Signed-off-by: Travis Bartley <tbartley@nvidia.com>

* updated link to pubmed (#8402)

Signed-off-by: Nithin Rao Koluguri <nithinraok>
Co-authored-by: Nithin Rao Koluguri <nithinraok>

* Update NFA video download link (#8406)

* update nfa nasa video link

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* update link in markdown

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

---------

Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>

* revert changes (#8410)

Signed-off-by: Chen Cui <chcui@nvidia.com>

* Fix dreambooth data sampler issue (#8400)

* Turn on drop last

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* Some neva fixes

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Fixed errors in the CTM gen functions (#8416)

Signed-off-by: Taejin Park <tango4j@gmail.com>

* add ensemble decoding fix (#8427)

Signed-off-by: Nithin Rao Koluguri <nithinraok>
Co-authored-by: Nithin Rao Koluguri <nithinraok>

* SDE bugfix log (#8430)

Signed-off-by: George <gzelenfroind@nvidia.com>

* mcore customization doc minor fix (#8421)

Signed-off-by: Huiying Li <willwin.lee@gmail.com>

* NeMo-Mistral to HF converter bugfix. (#8353)

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* Fixing mcore bert for TP, PP and SP (#8336)

* Fixing mcore bert for TP, PP and SP

* Fixing mcore bert for TP, PP and SP

* Fixing mcore version

* Fixing mcore version

* Update Jenkinsfile

Signed-off-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>

* Update Jenkinsfile

Signed-off-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>

* Update Jenkinsfile

Signed-off-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>

---------

Signed-off-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>
Co-authored-by: Shanmugam Ramasamy <shanmugamr@shanmugamr-mlt.client.nvidia.com>
Co-authored-by: Eric Harper <complex451@gmail.com>

* Add settings to suppress bf16 compile errors in CI on V100 (#8481)

* Add settings to suppress bf16 compile errors in CI on V100

Signed-off-by: Abhishree <abhishreetm@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Abhishree <abhishreetm@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* MoE parameter passing (#8255)

* MoE parameter passing

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* Pass EP/MoE params in consumer scripts.

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* PR fixes

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* Use latest commit of mcore-0.5

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* CI fix

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>
Co-authored-by: Alexandros Koumparoulis <akoumparouli@dgx1v-loki-21.nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update k2 version (#8478) (#8492)

Signed-off-by: Vladimir Bataev <vbataev@nvidia.com>

* Add fp8 support for SD/Update notebook paths (#8489)

* Add fp8 support for SD/Update notebook paths

Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Eric Harper <complex451@gmail.com>

* pin to 0.5.0 (#8465)

Signed-off-by: eharper <eharper@nvidia.com>

* Update NeMo Multimodal Requirements (#8515)

* Update requirements_multimodal.txt

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* update github raw content link (#8517)

Signed-off-by: Chen Cui <chcui@nvidia.com>

* Add dep notice for notebooks (#8522)

* add dep notice

Signed-off-by: eharper <eharper@nvidia.com>

* revert

Signed-off-by: eharper <eharper@nvidia.com>

---------

Signed-off-by: eharper <eharper@nvidia.com>

* Revert FP8 integration (#8520)

* Revert FP8 integration

Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

---------

Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update data prep notebook (#8532)

Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>

* before update branch with latest r1.23.0

* update to run with MLM ae2817b3dde4efb1515061a5311d01d8f85bd99c (runnable training and saving checkpoint)

* remove compile_helpers

* reverse changes from main branch to r1.23.0

* adding *_legacy files

* update MLM commit in Jenkinsfile to latest

* debugging Jenkinstest: test different mcore import in retro_dataset

* update Jenkinsfile edit megatron_retro_mutransfer_pretrain_legacy.py

* removing all mcore RETRO to pass the Jenkinstest

* fixing import legacy problem for tests/collections/nlp/test_indexed_retrieval_dataset.py

* update Jenkinsfile file to use TE v0.7

* update NeMo to work with latest mcore RETRO (solving TE problems)

* update TE commit Jenkinsfile to be the same with r1.23.0's Jenkinsfile

* update commit for MLM

* jenkinstest debugging

* temporary fix RETRO's __init__ for jenkinstest

* edit splits_string in jenkinsfile to correct format; put RETRO test in front to test faster

* edit splits_string in jenkinsfile to correct format; put RETRO test in front to test faster

* edit splits_string in jenkinsfile to correct format; put RETRO test in front to test faster

* edit splits_string in jenkinsfile to correct format; put RETRO test in front to test faster

* add model.data.dataloader_type=cyclic to jenkinsfile

* update code to work with latest megatron-lm main 81dab6067

* update M-LM commit in Jenkinsfile to latest main M-LM 81dab6067

* fix to by pass CI test bf16 problem (following this PR https://github.com/NVIDIA/NeMo/pull/8481/files)

* isort and black

* adjusting model.micro_batch_size to 1

* fix BRANCH = 'r1.23.0'

* replace tutorials dir from main branch to huvu/mcore_retro

* fix minor merges conflict

* update Jenkinsfile

* runnable with a temporary fix from Jacek (unfound -unfinished problem)

* runnable with a temporary fix from Jacek (unfound -unfinished problem)

* modified nlp_overrides.py back to original

* fix checkpoint from Jacek Bieniusiewicz

* config Jenkinsfile test

* set RETRO Jenkins MBS to 1

* black fix

* isort fix

* update TE commit

* update to latest Jenkinsfile with latest container and commits

* remove new RETRO jenkinstest

* merge latest main

* put RETRO Jenkinstest to the right place

* update code for megatron_retro_pretraining_legacy.py

* untrack ipa_cmudict-0.7b_nv23.01.txt

* untrack ipa_cmudict-0.7b_nv23.01.txt

* set config in megatron_retro_pretraining_legacy.py to megatron_retro_config_legacy

* update new RETRO jenkinstest to run faster

* merging latest main, and edit Jenkinstest

* [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

* huvu/mcore_retro_docs first commit

* update with main

* update RETRO docs

* fix scripts/tts_dataset_files/ipa_cmudict-0.7b_nv23.01.txt

* update docs

* update docs

* udpate RETRO docs

* update with Jennifer's comments

---------

Signed-off-by: eharper <eharper@nvidia.com>
Signed-off-by: Mikołaj Błaż <mblaz@nvidia.com>
Signed-off-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Signed-off-by: dimapihtar <dpihtar@gmail.com>
Signed-off-by: Piotr Żelasko <petezor@gmail.com>
Signed-off-by: Elena Rastorgueva <erastorgueva@nvidia.com>
Signed-off-by: Nithin Rao Koluguri <nithinraok>
Signed-off-by: Jimmy Zhang <jiemingz@nvidia.com>
Signed-off-by: Chen Cui <chcui@nvidia.com>
Signed-off-by: Mariana Graterol Fuenmayor <marianag@nvidia.com>
Signed-off-by: yaoyu-33 <yaoyu.094@gmail.com>
Signed-off-by: Alexandros Koumparoulis <akoumparouli@nvidia.com>
Signed-off-by: Sangkug Lym <slym@nvidia.com>
Signed-off-by: smajumdar <titu1994@gmail.com>
Signed-off-by: Krishna Puvvada <kpuvvada@nvidia.com>
Signed-off-by: Somshubra Majumdar <titu1994@gmail.com>
Signed-off-by: Aishwarya Bhandare <abhandare@nvidia.com>
Signed-off-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Signed-off-by: Dmytro Pykhtar <37850217+dimapihtar@users.noreply.github.com>
Signed-off-by: Valerie Sarge <vsarge@nvidia.com>
Signed-off-by: Huiying Li <huiyingl@nvidia.com>
Signed-off-by: Huiying Li <willwin.lee@gmail.com>
Signed-off-by: Travis Bartley <tbartley@nvidia.com>
Signed-off-by: Taejin Park <tango4j@gmail.com>
Signed-off-by: George <gzelenfroind@nvidia.com>
Signed-off-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>
Signed-off-by: Abhishree <abhishreetm@gmail.com>
Signed-off-by: Vladimir Bataev <vbataev@nvidia.com>
Signed-off-by: Mingyuan Ma <mingyuanm@nvidia.com>
Co-authored-by: eharper <eharper@nvidia.com>
Co-authored-by: mikolajblaz <mikolajblaz@users.noreply.github.com>
Co-authored-by: Eric Harper <complex451@gmail.com>
Co-authored-by: Xuesong Yang <1646669+XuesongYang@users.noreply.github.com>
Co-authored-by: Dmytro Pykhtar <37850217+dimapihtar@users.noreply.github.com>
Co-authored-by: dimapihtar <dpihtar@gmail.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Piotr Żelasko <petezor@gmail.com>
Co-authored-by: Elena Rastorgueva <80532067+erastorgueva-nv@users.noreply.github.com>
Co-authored-by: Nithin Rao <nithinrao.koluguri@gmail.com>
Co-authored-by: Somshubra Majumdar <titu1994@gmail.com>
Co-authored-by: JimmyZhang12 <67203904+JimmyZhang12@users.noreply.github.com>
Co-authored-by: Jimmy Zhang <jiemingz@nvidia.com>
Co-authored-by: Chen Cui <chcui@nvidia.com>
Co-authored-by: Huy Vu2 <huvu@login-eos01.eos.clusters.nvidia.com>
Co-authored-by: Mariana <47233618+mgrafu@users.noreply.github.com>
Co-authored-by: yaoyu-33 <54727607+yaoyu-33@users.noreply.github.com>
Co-authored-by: Bobby Chen <bobchen@nvidia.com>
Co-authored-by: akoumpa <153118171+akoumpa@users.noreply.github.com>
Co-authored-by: Sangkug Lym <slym@nvidia.com>
Co-authored-by: Krishna Puvvada <93558329+krishnacpuvvada@users.noreply.github.com>
Co-authored-by: Krishna Puvvada <kpuvvada@nvidia.com>
Co-authored-by: ashbhandare <ash.bhandare@gmail.com>
Co-authored-by: Aishwarya Bhandare <abhandare@nvidia.com>
Co-authored-by: Dmytro Pykhtar <dpykhtar@login-eos01.eos.clusters.nvidia.com>
Co-authored-by: Pablo Garay <palenq@gmail.com>
Co-authored-by: Valerie Sarge <vsarge@nvidia.com>
Co-authored-by: Huiying <willwin.lee@gmail.com>
Co-authored-by: Huiying Li <huiyingl@nvidia.com>
Co-authored-by: tbartley94 <90423858+tbartley94@users.noreply.github.com>
Co-authored-by: Taejin Park <tango4j@gmail.com>
Co-authored-by: George <37293288+Jorjeous@users.noreply.github.com>
Co-authored-by: Shanmugam Ramasamy <111910568+shanmugamr1992@users.noreply.github.com>
Co-authored-by: Shanmugam Ramasamy <shanmugamr@shanmugamr-mlt.client.nvidia.com>
Co-authored-by: Abhishree Thittenamane <47577437+athitten@users.noreply.github.com>
Co-authored-by: Alexandros Koumparoulis <akoumparouli@dgx1v-loki-21.nvidia.com>
Co-authored-by: Vladimir Bataev <vbataev@nvidia.com>
Co-authored-by: Ming <111467530+Victor49152@users.noreply.github.com>
Co-authored-by: Huy Vu2 <huvu@login-eos02.eos.clusters.nvidia.com>