Update ecflow package for wcoss2 GFS transition #555
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| # envir-p1.h | ||
| export job=${job:-$PBS_JOBNAME} | ||
| export jobid=${jobid:-$job.$PBS_JOBID} | ||
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| export RUN_ENVIR=emc | ||
| export envir=%ENVIR% | ||
| export MACHINE_SITE=%MACHINE_SITE% | ||
| export SENDDBN=${SENDDBN:-%SENDDBN:YES%} | ||
| export SENDDBN_NTC=${SENDDBN_NTC:-%SENDDBN_NTC:YES%} | ||
| if [[ "$envir" == prod && "$SENDDBN" == YES ]]; then | ||
| export eval=%EVAL:NO% | ||
| if [ $eval == YES ]; then | ||
| export SIPHONROOT=${UTILROOT}/para_dbn | ||
| else | ||
| export SIPHONROOT=/lfs/h1/ops/prod/dbnet_siphon | ||
| fi | ||
| export SIPHONROOT=${UTILROOT}/fakedbn | ||
| else | ||
| export SIPHONROOT=${UTILROOT}/fakedbn | ||
| fi | ||
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| export DBNROOT=$SIPHONROOT | ||
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| if [[ ! " prod para test " =~ " ${envir} " && " ops.prod ops.para " =~ " $(whoami) " ]]; then err_exit "ENVIR must be prod, para, or test [envir-p1.h]"; fi | ||
| export DATAROOT=/lfs/h2/emc/stmp/Lin.Gan/RUNDIRS/ecfops | ||
| export COMROOT=/lfs/h2/emc/ptmp/Lin.Gan/ecfops/com | ||
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| export COREROOT=/lfs/h2/emc/ptmp/production.core/$jobid | ||
| export NWROOT=/lfs/h1/ops/prod | ||
| export SENDECF=${SENDECF:-YES} | ||
| export SENDCOM=${SENDCOM:-YES} | ||
| export KEEPDATA=${KEEPDATA:-%KEEPDATA:NO%} | ||
| export TMPDIR=${TMPDIR:-${DATAROOT:?}} | ||
| if [ -n "%PDY:%" ]; then | ||
| export PDY=${PDY:-%PDY:%} | ||
| export CDATE=${PDY}%CYC:% | ||
| fi | ||
| if [ -n "%COMPATH:%" ]; then export COMPATH=${COMPATH:-%COMPATH:%}; fi | ||
| if [ -n "%MAILTO:%" ]; then export MAILTO=${MAILTO:-%MAILTO:%}; fi | ||
| if [ -n "%DBNLOG:%" ]; then export DBNLOG=${DBNLOG:-%DBNLOG:%}; fi | ||
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| @@ -1,2 +1,5 @@ | ||
| # . ${NWROOT:?}/versions/${model:?}.ver | ||
| # eval export HOME${model}=${NWROOT}/${model}.\${${model}_ver:?} | ||
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| . /lfs/h2/emc/global/noscrub/Lin.Gan/git/feature-ops-wcoss2/ecf/versions/${model:?}.ver | ||
| export HOMEgfs=/lfs/h2/emc/global/noscrub/Lin.Gan/git/feature-ops-wcoss2 |
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| @@ -0,0 +1,51 @@ | ||
| #PBS -S /bin/bash | ||
|
There was a problem hiding this comment. These EnKF jobs are new and we agreed to add them in a followup PR to avoid further bloating this current PR. |
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| #PBS -N enkfgdas_diag_%CYC% | ||
| #PBS -j oe | ||
| #PBS -q %QUEUE% | ||
| #PBS -A %PROJ%-%PROJENVIR% | ||
| #PBS -l walltime=00:06:00 | ||
| #PBS -l place=vscatter,select=1:mpiprocs=128:ompthreads=1:ncpus=128:mem=500GB | ||
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| model=gfs | ||
| %include <head.h> | ||
| %include <envir-p1.h> | ||
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| set -x | ||
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| export NET=%NET:gfs% | ||
| export RUN=%RUN% | ||
| export CDUMP=%RUN% | ||
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| ############################################################ | ||
| # Load modules | ||
| ############################################################ | ||
| module load cray-mpich/${cray_mpich_ver} | ||
| module load cray-pals/${cray_pals_ver} | ||
| module load cfp/${cfp_ver} | ||
| module load hdf5/${hdf5_ver} | ||
| module load netcdf/${netcdf_ver} | ||
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| module list | ||
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| ############################################################# | ||
| # WCOSS environment settings | ||
| ############################################################# | ||
| export cyc=%CYC% | ||
| export cycle=t%CYC%z | ||
| export USE_CFP=YES | ||
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| ############################################################ | ||
| # CALL executable job script here | ||
| ############################################################ | ||
| ${HOMEgfs}/jobs/JGDAS_ENKF_DIAG | ||
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| if [ $? -ne 0 ]; then | ||
| ecflow_client --msg="***JOB ${ECF_NAME} ERROR RUNNING J-SCRIPT ***" | ||
| ecflow_client --abort | ||
| exit | ||
| fi | ||
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| %include <tail.h> | ||
| %manual | ||
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| %end | ||
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,53 @@ | ||
| #PBS -S /bin/bash | ||
| #PBS -N enkfgdas_select_obs_%CYC% | ||
| #PBS -j oe | ||
| #PBS -q %QUEUE% | ||
| #PBS -A %PROJ%-%PROJENVIR% | ||
| #PBS -l walltime=00:10:00 | ||
| #PBS -l place=vscatter,select=30:mpiprocs=16:ompthreads=8:ncpus=128:mem=500GB | ||
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| model=gfs | ||
| %include <head.h> | ||
| %include <envir-p1.h> | ||
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| set -x | ||
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| export NET=%NET:gfs% | ||
| export RUN=%RUN% | ||
| export CDUMP=%RUN% | ||
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| ############################################################ | ||
| # Load modules | ||
| ############################################################ | ||
| module load cray-mpich/${cray_mpich_ver} | ||
| module load cray-pals/${cray_pals_ver} | ||
| module load cfp/${cfp_ver} | ||
| module load python/${python_ver} | ||
| module load hdf5/${hdf5_ver} | ||
| module load netcdf/${netcdf_ver} | ||
| module load crtm/${crtm_ver} | ||
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| module list | ||
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| ############################################################# | ||
| # WCOSS environment settings | ||
| ############################################################# | ||
| export cyc=%CYC% | ||
| export cycle=t%CYC%z | ||
| export USE_CFP=YES | ||
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| ############################################################ | ||
| # CALL executable job script here | ||
| ############################################################ | ||
| ${HOMEgfs}/jobs/JGDAS_ENKF_SELECT_OBS | ||
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| if [ $? -ne 0 ]; then | ||
| ecflow_client --msg="***JOB ${ECF_NAME} ERROR RUNNING J-SCRIPT ***" | ||
| ecflow_client --abort | ||
| exit | ||
| fi | ||
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| %include <tail.h> | ||
| %manual | ||
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| %end |
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| Original file line number | Diff line number | Diff line change |
|---|---|---|
| @@ -0,0 +1,52 @@ | ||
| #PBS -S /bin/bash | ||
| #PBS -N enkfgdas_update_%CYC% | ||
| #PBS -j oe | ||
| #PBS -q %QUEUE% | ||
| #PBS -A %PROJ%-%PROJENVIR% | ||
| #PBS -l walltime=00:30:00 | ||
| #PBS -l place=vscatter,select=50:mpiprocs=10:ompthreads=12:ncpus=120:mem=500GB | ||
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| model=gfs | ||
| %include <head.h> | ||
| %include <envir-p1.h> | ||
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| set -x | ||
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| export NET=%NET:gfs% | ||
| export RUN=%RUN% | ||
| export CDUMP=%RUN% | ||
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| ############################################################ | ||
| # Load modules | ||
| ############################################################ | ||
| module load cray-mpich/${cray_mpich_ver} | ||
| module load cray-pals/${cray_pals_ver} | ||
| module load cfp/${cfp_ver} | ||
| module load python/${python_ver} | ||
| module load hdf5/${hdf5_ver} | ||
| module load netcdf/${netcdf_ver} | ||
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| module list | ||
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| ############################################################# | ||
| # WCOSS environment settings | ||
| ############################################################# | ||
| export cyc=%CYC% | ||
| export cycle=t%CYC%z | ||
| export USE_CFP=YES | ||
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| ############################################################ | ||
| # CALL executable job script here | ||
| ############################################################ | ||
| ${HOMEgfs}/jobs/JGDAS_ENKF_UPDATE | ||
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| if [ $? -ne 0 ]; then | ||
| ecflow_client --msg="***JOB ${ECF_NAME} ERROR RUNNING J-SCRIPT ***" | ||
| ecflow_client --abort | ||
| exit | ||
| fi | ||
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| %include <tail.h> | ||
| %manual | ||
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| %end |
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Based on the logic here, regardless of the conditions, the result is:
export SIPHONROOT=${UTILROOT}/fakedbnAlso, a variable
evalis being exported for use somewhere down whenenvir==prodandSENDDBNisYES.Is that the desired outcome?
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The developer will always use fakedbn to test. eval is ok here
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What does
evaldo? Is it used anywhere other than the if-test?If the developer will always use fakeddbn, then the first if test
"$envir" == prodis not necessary (and this whole block just boiled down to this):