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The recent update of the gfs_utils version in PR #1082 introduced some gfs_util that weren't accounted for in the original PR. gfs_utils changed the name of the script that determines the machine to `detect_machine.sh`, so scripts that call that script had to be updated. The variable name holding the machine name has also changed (from `$target` to `$MACHINE_ID`) and it may now include a compiler at the end, so changes were necessary to account for that. The WW3 build is changed completely to use the UFS modules to be consistent with the rest of UFS instead of maintaining separate modules in workflow that may use different module versions. Also reverts an inadvertent removal of execute permissions for `checkout.sh` Fixes #1086
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