update to more recent hashes for jedi repos (#1298)

NOAA-EMC · Oct 4, 2024 · f9ea5e4 · f9ea5e4
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Showing 5 changed files with 5 additions and 5 deletions.
diff --git a/sorc/fv3-jedi b/sorc/fv3-jedi
diff --git a/sorc/oops b/sorc/oops
diff --git a/sorc/saber b/sorc/saber
diff --git a/sorc/ufo b/sorc/ufo
diff --git a/sorc/vader b/sorc/vader
+0 −2		src/fv3jedi/CMakeLists.txt
+10 −0		src/fv3jedi/FieldMetadata/FieldsMetadataDefault.h
+0 −82		src/fv3jedi/Fields/fv3jedi_fields_mod.f90
+8 −0		src/fv3jedi/Geometry/Geometry.cc
+3 −0		src/fv3jedi/Geometry/Geometry.h
+1 −0		src/fv3jedi/Geometry/Geometry.interface.h
+0 −1		src/fv3jedi/Geometry/GeometryParameters.h
+25 −0		src/fv3jedi/Geometry/fv3jedi_geom_interface_mod.F90
+28 −8		src/fv3jedi/Geometry/fv3jedi_geom_mod.f90
+43 −4		src/fv3jedi/Increment/Increment.cc
+0 −4		src/fv3jedi/Increment/Increment.interface.h
+0 −46		src/fv3jedi/Increment/fv3jedi_increment_interface_mod.F90
+1 −1		src/fv3jedi/ModelData/ModelData.cc
+36 −4		src/fv3jedi/State/State.cc
+0 −2		src/fv3jedi/State/State.interface.h
+0 −23		src/fv3jedi/State/fv3jedi_state_interface_mod.F90
+0 −502		src/fv3jedi/Utilities/fv3jedi_interpolation_mod.f90
+0 −447		src/fv3jedi/Utilities/slow_unstructured_interpolation_mod.F90
+19 −1		src/fv3jedi/VariableChange/Model2GeoVaLs/fv3jedi_vc_model2geovals_mod.f90
+0 −2		src/fv3jedi/VariableChange/Utils/surface_variables_mod.f90
+0 −2		test/testinput/addincrement_geos.yaml
+0 −2		test/testinput/addincrement_gfs.yaml
+0 −1		test/testinput/convertstate_gchp.yaml
+0 −1		test/testinput/convertstate_gchp_from_stretched_grid.yaml
+0 −1		test/testinput/convertstate_gchp_to_stretched_grid.yaml
+0 −1		test/testinput/convertstate_geos.yaml
+0 −1		test/testinput/convertstate_geos_cf.yaml
+1 −1		test/testinput/hofx_nomodel_lam_rrfs.yaml
+33 −1		test/testinput/hofx_nomodel_lam_rrfs_obs_on_lbc.yaml
+0 −1		test/testinput/increment_geos.yaml
+1 −2		test/testinput/increment_gfs.yaml
+10 −10		test/testoutput/3dvar_gfs_0obs.ref
+24 −24		test/testoutput/addincrement_gfs.ref
+12 −12		test/testoutput/convertstate_gchp.ref
+14 −14		test/testoutput/convertstate_gchp_from_stretched_grid.ref
+7 −7		test/testoutput/convertstate_gchp_to_stretched_grid.ref
+30 −30		test/testoutput/convertstate_geos.ref
+6 −6		test/testoutput/convertstate_geos_cf.ref
+29 −29		test/testoutput/convertstate_gfs.ref
+24 −24		test/testoutput/diffstates_gfs.ref
+2 −0		test/testoutput/hofx_nomodel_lam_rrfs_obs_on_lbc.ref
+79 −79		test/testoutput/hyb-3dvar.ref
+26 −26		test/testoutput/hyb-3dvar_fsoi_backward.ref
+27 −27		test/testoutput/hyb-3dvar_fsoi_forward.ref
+65 −65		test/testoutput/hyb-3dvar_gfs.ref
+4 −5		src/oops/assimilation/CostFunction.h
+6 −1		src/oops/assimilation/CostPert.h
+17 −8		src/oops/util/FieldSetHelpers.cc
+14 −0		CMakeLists.txt
+0 −20		ewok/templates/btrain.yaml
+1 −1		quench/mains/CMakeLists.txt
+6 −0		quench/src/CMakeLists.txt
+31 −15		quench/src/Covariance.h
+6 −6		quench/src/CovarianceParameters.h
+769 −199		quench/src/Fields.cc
+64 −25		quench/src/Fields.h
+163 −67		quench/src/Geometry.cc
+131 −46		quench/src/Geometry.h
+79 −81		quench/src/Increment.cc
+83 −54		quench/src/Increment.h
+148 −0		quench/src/Interpolation.cc
+98 −0		quench/src/Interpolation.h
+29 −4		quench/src/LinearVariableChange.cc
+24 −11		quench/src/LinearVariableChange.h
+4 −4		quench/src/LinearVariableChangeParameters.h
+10 −2		quench/src/ModelData.h
+44 −82		quench/src/State.cc
+78 −39		quench/src/State.h
+1 −0		quench/src/Traits.h
+5 −2		quench/src/TraitsFwd.h
+12 −5		quench/src/VariableChange.h
+2 −3		quench/src/VariableChangeParameters.h
+8 −8		src/saber/bump/BUMPParameters.h
+3 −0		src/saber/bump/subr_list.fypp
+1 −1		src/saber/bump/type_bump.fypp
+8 −8		src/saber/bump/type_bump_parameters.cc
+15 −15		src/saber/bump/type_bump_parameters.h
+34 −1		src/saber/bump/type_cmat.fypp
+3 −0		src/saber/bump/type_cmat_blk.fypp
+17 −8		src/saber/bump/type_geom.fypp
+131 −145		src/saber/bump/type_linop.fypp
+12 −14		src/saber/bump/type_nam.fypp
+3 −0		src/saber/bump/type_nicas.fypp
+3 −0		src/saber/bump/type_nicas_blk.fypp
+19 −31		src/saber/bump/type_nicas_cmp.fypp
+1 −1		src/saber/bump/type_samp.fypp
+739 −563		src/saber/bump/type_wind.fypp
+86 −227		src/saber/interpolation/AtlasInterpWrapper.cc
+20 −26		src/saber/interpolation/AtlasInterpWrapper.h
+1 −3		src/saber/interpolation/GaussToCS.cc
+68 −10		src/saber/interpolation/Interpolation.cc
+7 −2		src/saber/interpolation/Interpolation.h
+5 −5		src/saber/spectralb/GaussUVToGP.cc
+2 −1		src/saber/vader/DefaultCookbook.h
+4 −0		test/CMakeLists.txt
+2 −2		test/testdata/gauss_state.nc
+2 −0		test/testdeps/dirac_bump_9.txt
+0 −0		test/testdeps/dirac_fastlam_10.txt
+0 −0		test/testdeps/error_covariance_training_bump_wind_1.txt
+0 −0		test/testdeps/error_covariance_training_bump_wind_2.txt
+1 −2		test/testinput/dirac_bump_1.yaml
+1 −1		test/testinput/dirac_bump_2.yaml
+1 −1		test/testinput/dirac_bump_3.yaml
+1 −1		test/testinput/dirac_bump_4.yaml
+78 −0		test/testinput/dirac_bump_9.yaml
+111 −0		test/testinput/dirac_fastlam_10.yaml
+9 −9		test/testinput/dirac_spectralb_gauss_vader_1.yaml
+9 −9		test/testinput/dirac_spectralb_gauss_vader_2.yaml
+9 −9		test/testinput/dirac_spectralb_gauss_vader_3.yaml
+9 −9		test/testinput/dirac_spectralb_gauss_vader_4.yaml
+9 −9		test/testinput/dirac_spectralb_gauss_vader_5.yaml
+9 −9		test/testinput/dirac_write_fields.yaml
+0 −1		test/testinput/error_covariance_training_bump_hdiag-nicas_1.yaml
+3 −7		test/testinput/error_covariance_training_bump_wind_1.yaml
+47 −0		test/testinput/error_covariance_training_bump_wind_2.yaml
+10 −10		test/testinput/error_covariance_training_spectralb_mio.yaml
+9 −9		test/testinput/randomization_sqrtspectralb_2.yaml
+1 −0		test/testlist/saber_test_tier1-fastlam-regional_interpolation.txt
+3 −1		test/testlist/saber_test_tier1.txt
+40 −8		test/testref/dirac_bump_1.ref
+40 −8		test/testref/dirac_bump_2.ref
+36 −4		test/testref/dirac_bump_3.ref
+18 −2		test/testref/dirac_bump_4.ref
+97 −0		test/testref/dirac_bump_9.ref
+11 −11		test/testref/dirac_ens_both_geom.ref
+45 −0		test/testref/dirac_fastlam_10.ref
+1 −1		test/testref/dirac_interpolation_5.ref
+10 −10		test/testref/dirac_write_fields.ref
+0 −7		test/testref/error_covariance_training_bump_wind.ref
+23 −0		test/testref/error_covariance_training_bump_wind_1.ref
+23 −0		test/testref/error_covariance_training_bump_wind_2.ref
+24 −18		src/ufo/ObsBias.cc
+9 −1		src/ufo/ObsBiasOperator.cc
+1 −1		src/ufo/operators/oasim/ObsRadianceOASIM.cc
+4 −3		src/ufo/operators/oasim/ufo_oasim_mod.F90
+3 −18		src/ufo/operators/rttov/ufo_radiancerttov_tlad_mod.F90
+2 −10		src/ufo/operators/rttov/ufo_radiancerttov_utils_mod.F90
+3 −5		src/ufo/predictors/ObsMetaDataPredictor.cc
+3 −3		src/ufo/utils/IodaGroupIndices.cc
+4 −4		test/testinput/unit_tests/filters/obsfunctions/function_aircraftBCOffline.yaml
+21 −0		test/testinput/unit_tests/predictors/CMakeLists.txt
+73 −0		test/testinput/unit_tests/predictors/aircraft_bc.yaml
+6 −3		src/mo/eval_cloud_ice_mixing_ratio.cc
+1 −4		src/mo/eval_cloud_ice_mixing_ratio.h
+6 −3		src/mo/eval_cloud_liquid_mixing_ratio.cc
+1 −4		src/mo/eval_cloud_liquid_mixing_ratio.h
+9 −3		src/mo/eval_rain_mixing_ratio.cc
+1 −4		src/mo/eval_rain_mixing_ratio.h
+12 −3		src/mo/eval_ratio.cc
+12 −12		src/mo/eval_relative_humidity.cc
+3 −3		src/mo/eval_relative_humidity.h
+28 −25		src/mo/eval_total_mixing_ratio.cc
+6 −3		src/mo/eval_water_vapor_mixing_ratio.cc
+1 −4		src/mo/eval_water_vapor_mixing_ratio.h
+2 −1		src/vader/DefaultCookbook.h
+4 −3		src/vader/recipes/CloudIceMixingRatio_A.cc
+4 −3		src/vader/recipes/CloudLiquidMixingRatio_A.cc
+4 −3		src/vader/recipes/RainMixingRatio_A.cc
+7 −7		src/vader/recipes/TotalMixingRatio_A.cc
+4 −3		src/vader/recipes/WaterVaporMixingRatioWrtMoistAirAndCondensedWater_A.cc
+2 −2		test/testdata/aero6_gauss_state_F12.nc
+2 −2		test/testdata/gauss_state_F12.nc
+2 −2		test/testdata/rrfs_sd_gauss_state_F12.nc
+2 −2		test/testinput/vader_CloudIceMixingRatio_A.yaml
+2 −2		test/testinput/vader_CloudLiquidMixingRatio_A.yaml
+2 −2		test/testinput/vader_RainMixingRatio_A.yaml
+5 −5		test/testinput/vader_TotalMixingRatio_A.yaml
+2 −2		test/testinput/vader_WaterVaporMixingRatioWrtMoistAirAndCondensedWater_A.yaml