Better handling of seeder class for parallel execution. Added rhub actions to test on all OS and configurations. #43
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: UBSAN/ASAN Checks | |
| on: | |
| pull_request: | |
| branches: [ "main" ] | |
| workflow_dispatch: | |
| permissions: | |
| contents: read | |
| jobs: | |
| sanitizer-check: | |
| runs-on: ubuntu-latest | |
| env: | |
| CC: clang | |
| CXX: clang++ | |
| CXXFLAGS: "-fsanitize=undefined" | |
| LINK: clang++ | |
| ASAN: true | |
| UBSAN: true | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| RSPM: https://packagemanager.rstudio.com/cran/__linux__/jammy/latest | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: true | |
| ## R CMD check | |
| _R_CHECK_CRAN_INCOMING_: false | |
| _R_CHECK_LENGTH_1_CONDITION_: true | |
| _R_CHECK_LENGTH_1_LOGIC2_: true | |
| _R_CHECK_MATRIX_DATA_: true | |
| ## Specific to package | |
| _R_CHECK_USE_VALGRIND_: true | |
| UBSAN_OPTIONS: "print_stacktrace=1" | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Clang | |
| uses: egor-tensin/setup-clang@v1 | |
| with: | |
| version: latest | |
| platform: x64 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: release | |
| - name: Query dependencies | |
| run: | | |
| install.packages('remotes') | |
| saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2) | |
| writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version") | |
| shell: Rscript {0} | |
| - name: Cache R packages | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.R_LIBS_USER }} | |
| key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }} | |
| restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1- | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get install --yes libcurl4-openssl-dev | |
| # - name: Install system dependencies | |
| # env: | |
| # RHUB_PLATFORM: linux-x86_64-ubuntu-gcc | |
| # run: | | |
| # Rscript -e "remotes::install_github('r-hub/sysreqs')" | |
| # sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))") | |
| # sudo -s eval "$sysreqs" | |
| - name: Install dependencies | |
| run: | | |
| remotes::install_deps(dependencies = TRUE) | |
| remotes::install_cran("rcmdcheck") | |
| shell: Rscript {0} | |
| - name: Session info | |
| run: | | |
| options(width = 100) | |
| pkgs <- installed.packages()[, "Package"] | |
| sessioninfo::session_info(pkgs, include_base = TRUE) | |
| shell: Rscript {0} | |
| - name: Check with UBSAN and ASAN | |
| run: rcmdcheck::rcmdcheck(build_args = "--no-build-vignettes", args = c("--no-codoc", "--no-examples", "--no-manual", "--ignore-vignettes"), error_on = "warning", check_dir = "check") | |
| shell: Rscript {0} | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: ${{ runner.os }}-rrelease-results | |
| path: check |