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Adding Ohlmann solar penetration scheme to MOM_opacity #289

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Jul 31, 2024
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Adding Ohlmann solar penetration scheme to MOM_opacity #289

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6345d42
Adding Ohlmann solar pentration scheme to MOM_optics
fobryan3 Jul 16, 2024
4c26ed4
Fixed some violations of code style guide
fobryan3 Jul 17, 2024
499e4ec
Fixing a few more code style violations
fobryan3 Jul 17, 2024
c7d985c
Fixing yet another code style guide violation
fobryan3 Jul 17, 2024
aad503e
Cleaned up some coment statements. No changes to code.
fobryan3 Jul 29, 2024
3afc81b
Fixed formatting of string in get_param. Cleaned up extraneous FOB
fobryan3 Jul 30, 2024
a2630d7
Fix spelling (Ohlman to Ohlmann)
gustavo-marques Jul 30, 2024
fbfbfa9
Merge pull request #1 from gustavo-marques/optics_mods_patch1
fobryan3 Jul 30, 2024
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258 changes: 250 additions & 8 deletions src/parameterizations/vertical/MOM_opacity.F90
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Original file line number Diff line number Diff line change
Expand Up @@ -40,7 +40,18 @@ module MOM_opacity
real :: PenSW_flux_absorb !< A heat flux that is small enough to be completely absorbed in the next
!! sufficiently thick layer [C H T-1 ~> degC m s-1 or degC kg m-2 s-1].
real :: PenSW_absorb_Invlen !< The inverse of the thickness that is used to absorb the remaining
!! shortwave heat flux when it drops below PEN_SW_FLUX_ABSORB [H ~> m or kg m-2].
!! shortwave heat flux when it drops below PEN_SW_FLUX_ABSORB [H ~> m or kg m-2].

!! Lookup tables for Ohlmann solar penetration scheme
!! These would naturally exist as private module variables but that is prohibited in MOM6
real :: dlog10chl !< Chl increment within lookup table
real :: log10chl_min !< Lower bound of Chl in lookup table
real :: log10chl_max !< Upper bound of Chl in lookup table
real, allocatable, dimension(:) :: a1_lut,& !< Coefficient for band 1
& a2_lut,& !< Coefficient for band 2
& b1_lut,& !< Exponential decay scale for band 1
& b2_lut !< Exponential decay scale for band 2

integer :: answer_date !< The vintage of the order of arithmetic and expressions in the optics
!! calculations. Values below 20190101 recover the answers from the
!! end of 2018, while higher values use updated and more robust
Expand Down Expand Up @@ -77,11 +88,13 @@ module MOM_opacity
end type opacity_CS

!>@{ Coded integers to specify the opacity scheme
integer, parameter :: NO_SCHEME = 0, MANIZZA_05 = 1, MOREL_88 = 2, SINGLE_EXP = 3, DOUBLE_EXP = 4
integer, parameter :: NO_SCHEME = 0, MANIZZA_05 = 1, MOREL_88 = 2, SINGLE_EXP = 3, DOUBLE_EXP = 4,&
& OHLMANN_03 = 5
!>@}

character*(10), parameter :: MANIZZA_05_STRING = "MANIZZA_05" !< String to specify the opacity scheme
character*(10), parameter :: MOREL_88_STRING = "MOREL_88" !< String to specify the opacity scheme
character*(10), parameter :: OHLMANN_03_STRING = "OHLMANN_03" !< String to specify the opacity scheme
character*(10), parameter :: SINGLE_EXP_STRING = "SINGLE_EXP" !< String to specify the opacity scheme
character*(10), parameter :: DOUBLE_EXP_STRING = "DOUBLE_EXP" !< String to specify the opacity scheme

Expand Down Expand Up @@ -254,6 +267,16 @@ subroutine opacity_from_chl(optics, sw_total, sw_vis_dir, sw_vis_dif, sw_nir_dir
! use the "blue" band in the parameterizations to determine the e-folding
! depth of the incoming shortwave attenuation. The red portion is lumped
! into the net heating at the surface.
! Adding Ohlmann scheme. Needs sw_total and chl as inputs. Produces 2 penetrating bands.
! This implementation follows that in CESM-POP using a lookup table in log10(chl) space.
! The table is initialized in subroutine init_ohlmann and the coefficients are recovered
! with routines lookup_ohlmann_swpen and lookup_ohlmann_opacity.
! Note that this form treats the IR solar input implicitly: the sum of partioning
! coefficients < 1.0. The remainder is non-penetrating and is deposited in first layer
! irrespective of thickness. The Ohlmann (2003) paper states that the scheme is not valid
! for vertcal grids with first layer thickness < 2.0 meters.
!
! Ohlmann, J.C. Ocean radiant heating in climate models. J. Climate, 16, 1337-1351, 2003.
!
! Morel, A., Optical modeling of the upper ocean in relation to its biogenous
! matter content (case-i waters)., J. Geo. Res., {93}, 10,749--10,768, 1988.
Expand Down Expand Up @@ -353,13 +376,44 @@ subroutine opacity_from_chl(optics, sw_total, sw_vis_dir, sw_vis_dif, sw_nir_dir
do n=1,nbands
optics%sw_pen_band(n,i,j) = Inv_nbands*sw_pen_tot
enddo
enddo ; enddo
enddo; enddo
case (OHLMANN_03)
! want exactly two penetrating bands. If not, throw an error.
if ( nbands /= 2 ) then
call MOM_error(FATAL, "opacity_from_chl: CS%opacity_scheme requires nbands==2.")
endif
!$OMP parallel do default(shared) private(SW_vis_tot)
do j=js,je ; do i=is,ie
SW_vis_tot = 0.0 ! Ohlmann does not classify as vis/nir. Using vis to add up total
if (G%mask2dT(i,j) < 0.5) then
optics%sw_pen_band(1:2,i,j) = 0. ! Make sure there is a valid value for land points
else
if (multiband_vis_input ) then ! If multiband_vis_input is true then so is multiband_nir_input
SW_vis_tot = sw_vis_dir(i,j) + sw_vis_dif(i,j) + &
& sw_nir_dir(i,j) + sw_nir_dif(i,j)
elseif (total_sw_input) then
SW_vis_tot = sw_total(i,j)
else
call MOM_error(FATAL, "No shortwave input was provided.")
endif

! Bands 1-2 (Ohlmann factors A with coefficients for Table 1a)
optics%sw_pen_band(1:2,i,j) = lookup_ohlmann_swpen(chl_data(i,j),optics)*SW_vis_tot
endif
enddo; enddo
case default
call MOM_error(FATAL, "opacity_from_chl: CS%opacity_scheme is not valid.")
end select

!$OMP parallel do default(shared) firstprivate(chl_data)
do k=1,nz
!! FOB
!!! I don't think this is what we want to do with Ohlmann.
!!! The surface CHL is used in developing the parameterization.
!!! Only the surface CHL is used above in setting optics%sw_pen_band for all schemes.
!!! Seems inconsistent to use depth dependent CHL in opacity calculation.
!!! Nevertheless, leaving as is for now.
!! FOB
if (present(chl_3d)) then
do j=js,je ; do i=is,ie ; chl_data(i,j) = chl_3d(i,j,k) ; enddo ; enddo
endif
Expand Down Expand Up @@ -389,14 +443,22 @@ subroutine opacity_from_chl(optics, sw_total, sw_vis_dir, sw_vis_dif, sw_nir_dir
do n=2,optics%nbands
optics%opacity_band(n,i,j,k) = optics%opacity_band(1,i,j,k)
enddo
enddo ; enddo

enddo; enddo
case (OHLMANN_03)
!! not testing for 2 bands since we did it above
do j=js,je ; do i=is,ie
if (G%mask2dT(i,j) <= 0.5) then
optics%opacity_band(1:2,i,j,k) = CS%opacity_land_value
else
! Bands 1-2 (Ohlmann factors B with coefficients for Table 1a
optics%opacity_band(1:2,i,j,k) = lookup_ohlmann_opacity(chl_data(i,j),optics) * US%Z_to_m
endif
enddo; enddo
case default
call MOM_error(FATAL, "opacity_from_chl: CS%opacity_scheme is not valid.")
end select
enddo


end subroutine opacity_from_chl

!> This sets the blue-wavelength opacity according to the scheme proposed by
Expand Down Expand Up @@ -998,7 +1060,8 @@ subroutine opacity_init(Time, G, GV, US, param_file, diag, CS, optics)
"concentrations are translated into opacities. Currently "//&
"valid options include:\n"//&
" \t\t MANIZZA_05 - Use Manizza et al., GRL, 2005. \n"//&
" \t\t MOREL_88 - Use Morel, JGR, 1988.", &
" \t\t MOREL_88 - Use Morel, JGR, 1988. \n"//&
" \t\t OHLMANN_03 - Use Ohlmann, J Clim, 2003.", &
default=MANIZZA_05_STRING)
if (len_trim(tmpstr) > 0) then
tmpstr = uppercase(tmpstr)
Expand All @@ -1007,6 +1070,8 @@ subroutine opacity_init(Time, G, GV, US, param_file, diag, CS, optics)
CS%opacity_scheme = MANIZZA_05 ; scheme_string = MANIZZA_05_STRING
case (MOREL_88_STRING)
CS%opacity_scheme = MOREL_88 ; scheme_string = MOREL_88_STRING
case (OHLMANN_03_STRING)
CS%opacity_scheme = OHLMANN_03 ; scheme_string = OHLMANN_03_STRING
case default
call MOM_error(FATAL, "opacity_init: #DEFINE OPACITY_SCHEME "//&
trim(tmpstr) // "in input file is invalid.")
Expand Down Expand Up @@ -1072,6 +1137,9 @@ subroutine opacity_init(Time, G, GV, US, param_file, diag, CS, optics)
elseif (CS%Opacity_scheme == SINGLE_EXP ) then
if (optics%nbands /= 1) call MOM_error(FATAL, &
"set_opacity: \Cannot use a single_exp opacity scheme with nbands!=1.")
elseif (CS%Opacity_scheme == OHLMANN_03 ) then
if (optics%nbands /= 2) call MOM_error(FATAL, &
"set_opacity: \OHLMANN_03 scheme requires nbands==2")
endif

call get_param(param_file, mdl, "DEFAULT_ANSWER_DATE", default_answer_date, &
Expand Down Expand Up @@ -1143,8 +1211,175 @@ subroutine opacity_init(Time, G, GV, US, param_file, diag, CS, optics)
longname, 'm-1', conversion=US%m_to_Z)
enddo

!! FOB
if (CS%opacity_scheme == OHLMANN_03) then
! Set up the lookup table
call init_ohlmann_table(optics)
endif
!! FOB

end subroutine opacity_init

!> Initialize the lookup table for Ohlmann solar penetration scheme.
!! Step size in Chl is a constant in log-space to make lookups easy.
!! Step size is fine enough that nearest neighbor lookup is sufficiently
!! accurate.
subroutine init_ohlmann_table(optics)

implicit none

type(optics_type), intent(inout) :: optics

! Local variables

!! These are the data from Ohlmann (2003) Table 1a with additional
!! values provided by C. Ohlmann and implemented in CESM-POP by B. Briegleb
integer, parameter :: nval_tab1a = 31
real, parameter, dimension(nval_tab1a) :: &
chl_tab1a = (/ &
.001, .005, .01, .02, &
.03, .05, .10, .15, &
.20, .25, .30, .35, &
.40, .45, .50, .60, &
.70, .80, .90, 1.00, &
1.50, 2.00, 2.50, 3.00, &
4.00, 5.00, 6.00, 7.00, &
8.00, 9.00, 10.00 /)

real, parameter, dimension(nval_tab1a) :: &
a1_tab1a = (/ &
0.4421, 0.4451, 0.4488, 0.4563, &
0.4622, 0.4715, 0.4877, 0.4993, &
0.5084, 0.5159, 0.5223, 0.5278, &
0.5326, 0.5369, 0.5408, 0.5474, &
0.5529, 0.5576, 0.5615, 0.5649, &
0.5757, 0.5802, 0.5808, 0.5788, &
0.56965, 0.55638, 0.54091, 0.52442, &
0.50766, 0.49110, 0.47505 /)

real, parameter, dimension(nval_tab1a) :: &
a2_tab1a = (/ &
0.2981, 0.2963, 0.2940, 0.2894, &
0.2858, 0.2800, 0.2703, 0.2628, &
0.2571, 0.2523, 0.2481, 0.2444, &
0.2411, 0.2382, 0.2356, 0.2309, &
0.2269, 0.2235, 0.2206, 0.2181, &
0.2106, 0.2089, 0.2113, 0.2167, &
0.23357, 0.25504, 0.27829, 0.30274, &
0.32698, 0.35056, 0.37303 /)

real, parameter, dimension(nval_tab1a) :: &
b1_tab1a = (/ &
0.0287, 0.0301, 0.0319, 0.0355, &
0.0384, 0.0434, 0.0532, 0.0612, &
0.0681, 0.0743, 0.0800, 0.0853, &
0.0902, 0.0949, 0.0993, 0.1077, &
0.1154, 0.1227, 0.1294, 0.1359, &
0.1640, 0.1876, 0.2082, 0.2264, &
0.25808, 0.28498, 0.30844, 0.32932, &
0.34817, 0.36540, 0.38132 /)

real, parameter, dimension(nval_tab1a) :: &
b2_tab1a = (/ &
0.3192, 0.3243, 0.3306, 0.3433, &
0.3537, 0.3705, 0.4031, 0.4262, &
0.4456, 0.4621, 0.4763, 0.4889, &
0.4999, 0.5100, 0.5191, 0.5347, &
0.5477, 0.5588, 0.5682, 0.5764, &
0.6042, 0.6206, 0.6324, 0.6425, &
0.66172, 0.68144, 0.70086, 0.72144, &
0.74178, 0.76190, 0.78155 /)

!! Make the table big enough so step size is smaller
!! in log-space that any increment in Table 1a
integer, parameter :: nval_lut=401
real :: chl, log10chl_lut, w1, w2
integer :: n,m,mm1,err

allocate(optics%a1_lut(nval_lut),optics%b1_lut(nval_lut),&
& optics%a2_lut(nval_lut),optics%b2_lut(nval_lut),&
& stat=err)
if ( err /= 0 ) then
call MOM_error(FATAL,"init_ohlmann: Cannot allocate lookup table")
endif

optics%log10chl_min = log10(chl_tab1a(1))
optics%log10chl_max = log10(chl_tab1a(nval_tab1a))
optics%dlog10chl = (optics%log10chl_max - optics%log10chl_min)/(nval_lut-1)

! step through the lookup table
m = 2
do n=1,nval_lut
log10chl_lut = optics%log10chl_min + (n-1)*optics%dlog10chl
chl = 10.0**log10chl_lut
chl = max(chl_tab1a(1),min(chl,chl_tab1a(nval_tab1a)))

! find interval in Table 1a (m-1,m]
do while (chl > chl_tab1a(m))
m = m + 1
enddo
mm1 = m-1

! interpolation weights
w2 = (chl - chl_tab1a(mm1))/(chl_tab1a(m) - chl_tab1a(mm1))
w1 = 1. - w2

! fill in the tables
optics%a1_lut(n) = w1*a1_tab1a(mm1) + w2*a1_tab1a(m)
optics%a2_lut(n) = w1*a2_tab1a(mm1) + w2*a2_tab1a(m)
optics%b1_lut(n) = w1*b1_tab1a(mm1) + w2*b1_tab1a(m)
optics%b2_lut(n) = w1*b2_tab1a(mm1) + w2*b2_tab1a(m)
enddo

return
end subroutine init_ohlmann_table

!> Get the partion of total solar into bands from Ohlmann lookup table
function lookup_ohlmann_swpen(chl,optics) result(A)

implicit none

real, intent(in) :: chl
type(optics_type), intent(in) :: optics
real, dimension(2) :: A

! Local variables

real :: log10chl
integer :: n

! Make sure we are in the table
log10chl = max(optics%log10chl_min,min(log10(chl),optics%log10chl_max))
! Do a nearest neighbor lookup
n = nint( (log10chl - optics%log10chl_min)/optics%dlog10chl ) + 1

A(1) = optics%a1_lut(n)
A(2) = optics%a2_lut(n)

end function lookup_ohlmann_swpen

!> Get the opacity (decay scale) from Ohlmann lookup table
function lookup_ohlmann_opacity(chl,optics) result(B)

implicit none
real, intent(in) :: chl
type(optics_type), intent(in) :: optics
real, dimension(2) :: B

! Local variables
real :: log10chl
integer :: n

! Make sure we are in the table
log10chl = max(optics%log10chl_min,min(log10(chl),optics%log10chl_max))
! Do a nearest neighbor lookup
n = nint( (log10chl - optics%log10chl_min)/optics%dlog10chl ) + 1

B(1) = optics%b1_lut(n)
B(2) = optics%b2_lut(n)

return
end function lookup_ohlmann_opacity

subroutine opacity_end(CS, optics)
type(opacity_CS) :: CS !< Opacity control structure
Expand All @@ -1159,7 +1394,11 @@ subroutine opacity_end(CS, optics)
if (allocated(optics%max_wavelength_band)) &
deallocate(optics%max_wavelength_band)
if (allocated(optics%min_wavelength_band)) &
deallocate(optics%min_wavelength_band)
deallocate(optics%min_wavelength_band)
if (allocated(optics%a1_lut)) deallocate(optics%a1_lut)
if (allocated(optics%a2_lut)) deallocate(optics%a2_lut)
if (allocated(optics%b1_lut)) deallocate(optics%b1_lut)
if (allocated(optics%b2_lut)) deallocate(optics%b2_lut)
end subroutine opacity_end

!> \namespace mom_opacity
Expand All @@ -1179,4 +1418,7 @@ end subroutine opacity_end
!! and sea-ice in a global model, Geophys. Res. Let., 32, L05603,
!! doi:10.1029/2004GL020778.

!! Ohlmann, J.C., 2003: Ocean radiant heating in climate models.
!! J. Climate, 16, 1337-1351, 2003.

end module MOM_opacity
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