[ENH] Automatic reference/stacks ordering#34

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pdedumast merged 60 commits intomasterfrom 28_reference_stack

Nov 24, 2020

+1,077-458

Commits on Nov 11, 2020

Merge branch 'master' into 28_reference_stack
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DOC: Fixed inconsistencies for stacks_order parameter settings in documentation
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ENH: Integrate computation of stacks ordering to srr pipeline when no order is specified.
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ENH: Definition of identity module for stacks_order parameter settings in workflow
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BUG: Fixed mialsrtHistogramNormalization failing Test01
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BUG: Fixed MultipleMialsrtkSliceBySliceCorrectBiasField failing Test01
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ENH: Order stacks with 3 orthogonal as first - if view plane specified in filename.
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FIX: merge conflits
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STYLE: Attempt to remove run id management in all MultipleXXX module
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FIX: Removed stacks run id management from postprocessing module
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STYLE: Attempt to remove all useless bids_dir node input parameters
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FIX: MultipleMialsrtkSliceBySliceCorrectBiasFieldInputS fif for Test 01
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FIX: Missing )
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STYLE: Attempt to remove all useless bids_dir node input parameters. Update in srr
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FIX: Merge to revert commit that removed bids_dir parameters
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Revert "STYLE: Attempt to remove all useless bids_dir node input parameters. Update in srr"
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Commits on Nov 12, 2020

Merge branch 'master' into 28_reference_stack
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Commits on Nov 13, 2020

Commits on Nov 16, 2020

Commits on Nov 19, 2020

Commits on Nov 20, 2020