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FIX: typo in superresolution_pipeline.sh
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sebastientourbier committed May 9, 2019
1 parent 26eeacc commit a64faf9
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion data/code/superresolution_pipeline.sh
Original file line number Diff line number Diff line change
Expand Up @@ -133,7 +133,7 @@ do
cmdIntensityNLM="$cmdIntensityNLM -i $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}.nii.gz -o $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}.nii.gz"
cmdIntensity="$cmdIntensity -i $RESULTS/${stack}_uni_bcorr_reo_iteration_${ITER}.nii.gz -o $RESULTS/${stack}_uni_bcorr_reo_iteration_${ITER}.nii.gz"
cmdHistogramNormalization="$cmdHistogramNormalization -i $RESULTS/${stack}_uni_bcorr_reo_iteration_${ITER}.nii.gz -m $RESULTS/${stack}_desc-brain_mask_reo_iteration_${ITER}.nii.gz -o $RESULTS/${stack}_uni_bcorr_reo_iteration_${ITER}_histnorm.nii.gz"
cmdHistogramNormalizationNLM="$cmdHistogramNormalization -i $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}.nii.gz -m $RESULTS/${stack}_desc-brain_mask_reo_iteration_${ITER}.nii.gz -o $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}_histnorm.nii.gz"
cmdHistogramNormalizationNLM="$cmdHistogramNormalizationNLM -i $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}.nii.gz -m $RESULTS/${stack}_desc-brain_mask_reo_iteration_${ITER}.nii.gz -o $RESULTS/${stack}_nlm_uni_bcorr_reo_iteration_${ITER}_histnorm.nii.gz"

done < "$SCANS"

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