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Releases: MedVisBonn/eyeseg

v1.0.2

28 Sep 08:24
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v1.0.2 (2023-09-28)

Fix

  • fix(pyproject.toml): downgrade to tensorflow 2.11 (81ca68a)

v1.0.1

27 Sep 20:49
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v1.0.1 (2023-09-27)

Build

  • build(poetry.lock): update dependencies (08abc52)

Ci

  • ci(PythonSematicRelease): update python semantic release to v8 (2a50002)

Documentation

  • docs(README.md): add small clarification on what to expect when using the docker image (6d6df66)

  • docs(README.md): fixes typo and docker image version (1a4d631)

  • docs(README.md): add PyPI badge and mention eyepy fory for loading the results (771a38f)

Fix

  • fix(segment.py): fix bug where existing layers are used for drusen computation instead of predicted (15d0114)

v1.0.0

23 May 16:05
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Fix

  • pyproject.toml: Switch to major versioning (139d462)
  • pyproject.toml;-CITATION.cff: Fix versioning (ca4dbab)

Breaking

Documentation

  • README.md;-CITATION.cff: Add prefered citation, change from eyeseg to eyesegpy because of availability (7d638c0)
  • README: Add bibtex reference (feead26)

v0.1.0

23 May 13:45
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Feature

  • eyeseg: Add Bioptigen model (8b99881)
  • eyeseg: Commit latest changes (7c394e9)
  • Dockerfile: Update to tensorflow 2.9.1 and set WORKDIR to /home/data by default (2709a68)
  • eyeseg: Add train command to train model (1a86c2c)
  • scripts: Separate drusen quantification from drusen computation; add plotting of overview and B-scans (3d8aa8e)
  • scripts: Predict layers, compute drusen and quantify drusen with user defined grid (bec8d82)

Fix

  • pyproject.toml: Update eyepie to 0.6.3 (1e065a2)
  • quantify.py: Add number of B-scans and correct volume name in results (d399227)
  • plot-bscans: Specify any folder in the input folder hierarchy to plot bscans for all contained volumes (3cf6ac1)
  • scripts: Keep folder structure of input for processed folder (bb6bcef)
  • plot_bscans.py: Use all volumes if none are specified (c76b306)
  • scripts: Fixed output_path overwrite and improve logging (d919cc1)
  • scripts: Fix missing context for drusen command and missing output folder (e82e4b9)

Breaking

Documentation

  • README.md: Remove image download note - use dockerhub instead (094cca0)
  • scripts: Add logging and informative messages to the octseg application (9c36c91)
  • README.md: Complete the documentation for the current functionalities (5f3b17c)
  • README.md: Add development documentation (f84e9d5)