Swtich to dupradar from nf-core

MatthiasZepper · Mar 7, 2024 · cc1bf2c · cc1bf2c
1 parent ddb0f3b
commit cc1bf2c
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Showing 12 changed files with 857 additions and 50 deletions.
diff --git a/modules.json b/modules.json
@@ -35,6 +35,11 @@
                         "git_sha": "ec155021a9104441bf6a9bae3b55d1b5b0bfdb3a",
                         "installed_by": ["modules"]
                     },
+                    "dupradar": {
+                        "branch": "dupradar",
+                        "git_sha": "a9e8634e277e6fc381ffa1430717db5c54d9776e",
+                        "installed_by": ["modules"]
+                    },
                     "fastp": {
                         "branch": "master",
                         "git_sha": "003920c7f9a8ae19b69a97171922880220bedf56",

diff --git a/modules/local/dupradar/main.nf b/modules/local/dupradar/main.nf
diff --git a/modules/nf-core/dupradar/environment.yml b/modules/nf-core/dupradar/environment.yml
diff --git a/modules/nf-core/dupradar/main.nf b/modules/nf-core/dupradar/main.nf
diff --git a/modules/nf-core/dupradar/meta.yml b/modules/nf-core/dupradar/meta.yml
diff --git a/modules/local/dupradar/nextflow.config → modules/nf-core/dupradar/nextflow.config b/modules/local/dupradar/nextflow.config → modules/nf-core/dupradar/nextflow.config
diff --git a/modules/nf-core/dupradar/templates/dupradar.r b/modules/nf-core/dupradar/templates/dupradar.r