Merge pull request #178 from mattip/v0.3.28

OpenBLAS v0.3.28

.github/workflows/posix.yml

@@ -11,7 +11,7 @@ on:
 
 env:
   REPO_DIR: OpenBLAS
-  OPENBLAS_COMMIT: "d11e7340"
+  OPENBLAS_COMMIT: "v0.3.28"
   MACOSX_DEPLOYMENT_TARGET: 10.9
 
 jobs:

.github/workflows/windows.yml

@@ -8,7 +8,7 @@ on:
   workflow_dispatch: null
 
 env:
-  OPENBLAS_COMMIT: "d11e7340"
+  OPENBLAS_COMMIT: "v0.3.28"
   OPENBLAS_ROOT: "c:\\opt"
   # Preserve working directory for calls into bash
   # Without this, invoking bash will cd to the home directory
@@ -45,13 +45,14 @@ jobs:
           echo "PLAT=i686" >> $env:GITHUB_ENV
           echo "WHEEL_PLAT=win32" >> $env:GITHUB_ENV
           echo "MSYSTEM=MINGW32" >> $env:GITHUB_ENV
-          echo "LDFLAGS=-static -static-libgcc" >> $env:GITHUB_ENV
+          # No ucrt on 32-bits, so use _snprintf_c instead
+          echo "LDFLAGS=-static -static-libgcc -Wl,--defsym,_quadmath_snprintf=__snprintf_c" >> $env:GITHUB_ENV
           echo "BUILD_BITS=32" >> $env:GITHUB_ENV
         } else {
           echo "PLAT=x86_64" >> $env:GITHUB_ENV
           echo "WHEEL_PLAT=win_amd64" >> $env:GITHUB_ENV
           echo "MSYSTEM=UCRT64" >> $env:GITHUB_ENV
-          echo "LDFLAGS=-lucrt -static -static-libgcc" >> $env:GITHUB_ENV
+          echo "LDFLAGS=-lucrt -static -static-libgcc -Wl,--defsym,quadmath_snprintf=snprintf" >> $env:GITHUB_ENV
           echo "BUILD_BITS=64" >> $env:GITHUB_ENV
         }
         if ( ${{ matrix.INTERFACE64 }} -eq "1" ) {

.travis.yml

@@ -2,7 +2,7 @@ env:
     global:
         # The archive that gets built has name from ``git describe`` on this
         # commit.
-        - OPENBLAS_COMMIT: "d11e7340"
+        - OPENBLAS_COMMIT: "v0.3.28"
         - REPO_DIR=OpenBLAS
 
 sudo: required

patches-windows/openblas-make-libs.patch

@@ -0,0 +1,15 @@
+diff --git a/exports/Makefile b/exports/Makefile
+index 668a4866e..956b51bf4 100644
+--- a/exports/Makefile
++++ b/exports/Makefile
+@@ -126,8 +126,9 @@ dll  : ../$(LIBDLLNAME)
+ ../$(LIBDLLNAME) : ../$(LIBNAME) $(LIBPREFIX).def dllinit.$(SUFFIX)
+ 	$(RANLIB) ../$(LIBNAME)
+ 	$(CC) $(CFLAGS) $(LDFLAGS) $(LIBPREFIX).def dllinit.$(SUFFIX) \
+-	-shared -o ../$(LIBDLLNAME) -Wl,--out-implib,../$(IMPLIBNAME) \
++	-shared -o ../$(LIBDLLNAME) -Wl,-gc-sections -Wl,-s -Wl,-Map,output.map \
+ 	-Wl,--whole-archive ../$(LIBNAME) -Wl,--no-whole-archive $(FEXTRALIB) $(EXTRALIB)
++	dlltool -D $(LIBDLLNAME) -d $(LIBPREFIX).def -l ../$(LIBDLLNAME).a
+
+ $(LIBPREFIX).def : $(GENSYM)
+ 	./$(GENSYM) win2k    $(ARCH) dummy $(EXPRECISION) $(NO_CBLAS) $(NO_LAPACK) $(NO_LAPACKE) $(NEED2UNDERSCORES) $(ONLY_CBLAS) "$(SYMBOLPREFIX)" "$(SYMBOLSUFFIX)" $(BUILD_LAPACK_DEPRECATED) $(BUILD_BFLOAT16) $(BUILD_SINGLE) $(BUILD_DOUBLE) $(BUILD_COMPLEX) $(BUILD_COMPLEX16) > $(@F)

pyproject.toml

@@ -8,8 +8,8 @@ build-backend = "setuptools.build_meta"
 
 [project]
 name = "scipy-openblas64"
-# v0.3.27-350-gd11e7340
-version = "0.3.27.350.0"
+# v0.3.28
+version = "0.3.28.0.0"
 requires-python = ">=3.7"
 description = "Provides OpenBLAS for python packaging"
 readme = "README.md"

tools/LICENSE_linux.txt

@@ -5,7 +5,7 @@ This binary distribution of NumPy also bundles the following software:
 
 
 Name: OpenBLAS
-Files: numpy.libs/libopenblas*.so
+Files: numpy.libs/libscipy_openblas*.so
 Description: bundled as a dynamically linked library
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution
@@ -41,7 +41,7 @@ License: BSD-3-Clause-Attribution
 
 
 Name: LAPACK
-Files: numpy.libs/libopenblas*.so
+Files: numpy.libs/libscipy_openblas*.so
 Description: bundled in OpenBLAS
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution

tools/LICENSE_osx.txt

@@ -4,7 +4,7 @@
 This binary distribution of NumPy also bundles the following software:
 
 Name: OpenBLAS
-Files: numpy/.dylibs/libopenblas*.so
+Files: numpy/.dylibs/libscipy_openblas*.so
 Description: bundled as a dynamically linked library
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution
@@ -40,7 +40,7 @@ License: BSD-3-Clause-Attribution
 
 
 Name: LAPACK
-Files: numpy/.dylibs/libopenblas*.so
+Files: numpy/.dylibs/libscipy_openblas*.so
 Description: bundled in OpenBLAS
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution

tools/LICENSE_win32.txt

@@ -5,7 +5,7 @@ This binary distribution of NumPy also bundles the following software:
 
 
 Name: OpenBLAS
-Files: numpy.libs\libopenblas*.dll
+Files: libs/libscipy_openblas*.dll
 Description: bundled as a dynamically linked library
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution
@@ -41,7 +41,7 @@ License: BSD-3-Clause-Attribution
 
 
 Name: LAPACK
-Files: numpy.libs\libopenblas*.dll
+Files: libs/libscipy_openblas*.dll
 Description: bundled in OpenBLAS
 Availability: https://github.com/OpenMathLib/OpenBLAS/
 License: BSD-3-Clause-Attribution
@@ -96,7 +96,7 @@ License: BSD-3-Clause-Attribution
 
 
 Name: GCC runtime library
-Files: numpy.libs\libopenblas*.dll
+Files: libs/libscipy_openblas*.dll
 Description: statically linked to files compiled with gcc
 Availability: https://gcc.gnu.org/git/?p=gcc.git;a=tree;f=libgfortran
 License: GPL-3.0-with-GCC-exception
@@ -878,25 +878,3 @@ may consider it more useful to permit linking proprietary applications with
 the library.  If this is what you want to do, use the GNU Lesser General
 Public License instead of this License.  But first, please read
 <http://www.gnu.org/philosophy/why-not-lgpl.html>.
-
-Name: libquadmath
-Files: numpy.libs\libopenb*.dll
-Description: statically linked to files compiled with gcc
-Availability: https://gcc.gnu.org/git/?p=gcc.git;a=tree;f=libquadmath
-License: LGPL-2.1-or-later
-
-    GCC Quad-Precision Math Library
-    Copyright (C) 2010-2019 Free Software Foundation, Inc.
-    Written by Francois-Xavier Coudert  <fxcoudert@gcc.gnu.org>
-
-    This file is part of the libquadmath library.
-    Libquadmath is free software; you can redistribute it and/or
-    modify it under the terms of the GNU Library General Public
-    License as published by the Free Software Foundation; either
-    version 2.1 of the License, or (at your option) any later version.
-
-    Libquadmath is distributed in the hope that it will be useful,
-    but WITHOUT ANY WARRANTY; without even the implied warranty of
-    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
-    Lesser General Public License for more details.
-    https://www.gnu.org/licenses/old-licenses/lgpl-2.1.html

tools/build_openblas.sh

@@ -76,7 +76,7 @@ fflags="$fextra $cflags -frecursive -ffpe-summary=invalid,zero"
 
 # Set suffixed-ILP64 flags
 if [ "$if_bits" == "64" ]; then
-    SYMBOLSUFFIX="64_"
+    LIBNAMESUFFIX="64_"
     interface_flags="INTERFACE64=1 SYMBOLSUFFIX=64_ LIBNAMESUFFIX=64_"
     # We override FCOMMON_OPT, so we need to set default integer manually
     fflags="$fflags -fdefault-integer-8"
@@ -90,8 +90,13 @@ interface_flags="$interface_flags SYMBOLPREFIX=scipy_ LIBNAMEPREFIX=scipy_ FIXED
 # Build name for output library from gcc version and OpenBLAS commit.
 GCC_TAG="gcc_$(gcc -dumpversion | tr .- _)"
 OPENBLAS_VERSION=$(git describe --tags --abbrev=8)
+
+# Patch OpenBLAS build to resolve all symbols and avoid linking
+# with libquadmath
+patch -p1 < ../patches-windows/openblas-make-libs.patch
+
 # Build OpenBLAS
-# Variable used in creating output libraries
+CFLAGS="$CFLAGS -fvisibility=protected -fno-ident" \
 make BINARY=$build_bits DYNAMIC_ARCH=1 USE_THREAD=1 USE_OPENMP=0 \
      NUM_THREADS=24 NO_WARMUP=1 NO_AFFINITY=1 CONSISTENT_FPCSR=1 \
      BUILD_LAPACK_DEPRECATED=1 TARGET=PRESCOTT BUFFERSIZE=20\
@@ -100,8 +105,38 @@ make BINARY=$build_bits DYNAMIC_ARCH=1 USE_THREAD=1 USE_OPENMP=0 \
      FCOMMON_OPT="$fflags" \
      MAX_STACK_ALLOC=2048 \
      $interface_flags
+
+# Make sure quadmath library is not statically linked in to the DLL by checking
+# the output.map generated by the linker when using `-Wl,-gc-sections -Wl,-s`
+# the map will have libname(o-filename) for each function pulled out of the
+# library libname
+# The file itself appears in the map, so look for "libquadmath.a(". Use '-A 3'
+# to show a bit of context if any symbols appear (which should not happen)
+set +e
+grep -A 2 "libquadmath.a(" exports/output.map
+case $? in
+  0)
+    echo "link uses libquadmath.a when it should not"
+    exit -1
+  ;;
+  1)
+    if [ -f exports/output.map ]; then
+      echo "Good, verified no 'libquadmath' used when linking"
+    else
+      echo "error occurred"
+      exit -1
+    fi
+  ;;
+  *)
+    echo "grep returned $?, error occurred"
+    exit -1
+  ;;
+esac
+set -e
+
 make PREFIX=$openblas_root/$build_bits $interface_flags install
-DLL_BASENAME=libscipy_openblas${SYMBOLSUFFIX}${LIBNAMESUFFIX}
+DLL_BASENAME=libscipy_openblas${LIBNAMESUFFIX}
+cp -f *.dll.a $openblas_root/$build_bits/lib/${DLL_BASENAME}.dll.a
 
 # OpenBLAS does not build a symbol-suffixed static library on Windows:
 # do it ourselves. On 32-bit builds, the objcopy.def names need a '_' prefix
@@ -143,16 +178,8 @@ else
     sed -e "s/^Cflags.*/\0 -DBLAS_SYMBOL_PREFIX=scipy_/" -i pkgconfig/scipy-openblas.pc
 fi
 popd
-# Build template site.cfg for using this build
-cat > ${build_bits}/site.cfg.template << EOF
-[openblas${SYMBOLSUFFIX}]
-libraries = $DLL_BASENAME
-library_dirs = {openblas_root}\\${build_bits}\\lib
-include_dirs = {openblas_root}\\${build_bits}\\include
-EOF
-
 ls $openblas_root/$build_bits/lib
 
-zip_name="openblas${SYMBOLSUFFIX}-${OPENBLAS_VERSION}-${plat_tag}-${GCC_TAG}.zip"
+zip_name="openblas${LIBNAMESUFFIX}-${OPENBLAS_VERSION}-${plat_tag}-${GCC_TAG}.zip"
 zip -r $zip_name $build_bits
 cp $zip_name ${builds_dir}

tools/build_steps.sh

@@ -174,13 +174,13 @@ function do_build_lib {
     patch_source
     echo start building
     if [ -v dynamic_list ]; then
-        CFLAGS="$CFLAGS -fvisibility=protected -Wno-uninitialized" \
+        CFLAGS="$CFLAGS -fvisibility=protected -Wno-uninitialized -fno-ident" \
         make BUFFERSIZE=20 DYNAMIC_ARCH=1 \
             USE_OPENMP=0 NUM_THREADS=64 \
             DYNAMIC_LIST="$dynamic_list" \
             BINARY=$bitness $interface_flags $target_flags shared 2>&1 1>/dev/null
     else
-        CFLAGS="$CFLAGS -fvisibility=protected -Wno-uninitialized" \
+        CFLAGS="$CFLAGS -fvisibility=protected -Wno-uninitialized -fno-ident" \
         make BUFFERSIZE=20 DYNAMIC_ARCH=1 \
             USE_OPENMP=0 NUM_THREADS=64 \
             BINARY=$bitness $interface_flags $target_flags shared 2>&1 1>/dev/null