MRtrix3 demo code

Demonstration code as included in the MRtrix3 NeuroImage 2019 paper.

Installation

This assumes you have already installed MRtrix3 from source, using the instructions provided in the documentation, and that your main MRtrix3 installation resides in the ~/mrtrix3 folder (other locations are possible, please edit the instructions below to match your installation).

git clone https://github.com/MRtrix3/MRtrix3_demo_code.git
cd MRtrix3_demo_code
ln -s ~/mrtrix3/build
./build

at which point you should be able to invoke both the Python and C++ commands as:

bin/demo_binary
bin/demo_script