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issue #27 convert to gwasglue2 summaryset inside gwasvcf package #28

Merged
merged 25 commits into from
Sep 5, 2023
Merged

issue #27 convert to gwasglue2 summaryset inside gwasvcf package #28

merged 25 commits into from
Sep 5, 2023

Commits on Aug 9, 2023

  1. add .name_repair 

    Trying to avoid error in checks:
(still not working)
- Quitting from lines 271-273 [unnamed-chunk-28] (guide.Rmd)
   Error: processing vignette 'guide.Rmd' failed with diagnostics:
   The `validate` argument of
 `as_tibble()` was deprecated in tibble 2.0.0
   and is now defunct.
  Please use the `.name_repair` argument instead.
    @ritarasteiro
    ritarasteiro committed Aug 9, 2023
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  2. new gwasglue2 section

    @ritarasteiro
    ritarasteiro committed Aug 9, 2023
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  3. creating a gwasglue2 SummarySet

    @ritarasteiro
    ritarasteiro committed Aug 9, 2023
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  4. import gwasglue2

    @ritarasteiro
    ritarasteiro committed Aug 9, 2023
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  5. add export

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    ritarasteiro committed Aug 9, 2023
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  6. add .name_repair='minimal'

    @ritarasteiro
    ritarasteiro committed Aug 9, 2023
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Commits on Aug 10, 2023

  1. Add NEWS.md

    @ritarasteiro
    ritarasteiro committed Aug 10, 2023
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  2. fix check()

    @ritarasteiro
    ritarasteiro committed Aug 10, 2023
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  3. Update gwasglue.R

    @ritarasteiro
    ritarasteiro committed Aug 10, 2023
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  4. add NEWS

    @ritarasteiro
    ritarasteiro committed Aug 10, 2023
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  5. add ctb

    @ritarasteiro
    ritarasteiro committed Aug 10, 2023
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Commits on Aug 28, 2023

  1. Use markdown in all roxygen helpfiles

    @remlapmot
    remlapmot committed Aug 28, 2023
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  2. usethis::use_tidy_description()

    @remlapmot
    remlapmot committed Aug 28, 2023
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  3. Add links and replace gwasvcftools reference

    @remlapmot
    remlapmot committed Aug 28, 2023
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  4. Add links and replace gwasvcftools reference

    @remlapmot
    remlapmot committed Aug 28, 2023
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  5. Replace reference to old gwasvcftools package

    @remlapmot
    remlapmot committed Aug 28, 2023
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  6. Amend formatting for md

    @remlapmot
    remlapmot committed Aug 28, 2023
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  7. devtools::document()

    @remlapmot
    remlapmot committed Aug 28, 2023
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  8. Delete blank line

    @remlapmot
    remlapmot committed Aug 28, 2023
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  9. Delete blank line

    @remlapmot
    remlapmot committed Aug 28, 2023
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  10. Delete release date

    @remlapmot
    remlapmot committed Aug 28, 2023
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  11. Edit formatting

    @remlapmot
    remlapmot committed Aug 28, 2023
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  12. Delete blank line

    @remlapmot
    remlapmot committed Aug 28, 2023
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  13. Fix Summaryset to SummarySet

    @remlapmot
    remlapmot committed Aug 28, 2023
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Commits on Sep 4, 2023

  1. Merge pull request #31 from remlapmot/rita-plus-tp 

    Suggested additional fixes
    @ritarasteiro
    ritarasteiro authored Sep 4, 2023
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