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Dev: link for spine data updated
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skaliy committed Sep 4, 2023
1 parent 166e733 commit bbc4b6a
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Showing 5 changed files with 5 additions and 4 deletions.
2 changes: 1 addition & 1 deletion fastMONAI/__init__.py
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@@ -1 +1 @@
__version__ = "0.3.9"
__version__ = "0.4.0"
2 changes: 1 addition & 1 deletion fastMONAI/external_data.py
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Expand Up @@ -22,7 +22,7 @@ class MURLs():
IXI_DATA = 'http://biomedic.doc.ic.ac.uk/brain-development/downloads/IXI/IXI-T1.tar'
IXI_DEMOGRAPHIC_INFORMATION = 'http://biomedic.doc.ic.ac.uk/brain-development/downloads/IXI/IXI.xls'
CHENGWEN_CHU_SPINE_DATA = 'https://drive.google.com/uc?id=1rbm9-KKAexpNm2mC9FsSbfnS8VJaF3Kn&confirm=t'
EXAMPLE_SPINE_DATA = 'https://drive.google.com/uc?id=1Ms3Q6MYQrQUA_PKZbJ2t2NeYFQ5jloMh'
EXAMPLE_SPINE_DATA = 'https://drive.google.com/uc?id=1K1J2wmWxYUPY0NbylcV4Otv88EqCL4Ys'
MEDMNIST_DICT = {'OrganMNIST3D': 'https://zenodo.org/record/6496656/files/organmnist3d.npz?download=1',
'NoduleMNIST3D': 'https://zenodo.org/record/6496656/files/nodulemnist3d.npz?download=1',
'AdrenalMNIST3D': 'https://zenodo.org/record/6496656/files/adrenalmnist3d.npz?download=1',
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2 changes: 1 addition & 1 deletion nbs/09_external_data.ipynb
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Expand Up @@ -52,7 +52,7 @@
" IXI_DATA = 'http://biomedic.doc.ic.ac.uk/brain-development/downloads/IXI/IXI-T1.tar'\n",
" IXI_DEMOGRAPHIC_INFORMATION = 'http://biomedic.doc.ic.ac.uk/brain-development/downloads/IXI/IXI.xls'\n",
" CHENGWEN_CHU_SPINE_DATA = 'https://drive.google.com/uc?id=1rbm9-KKAexpNm2mC9FsSbfnS8VJaF3Kn&confirm=t'\n",
" EXAMPLE_SPINE_DATA = 'https://drive.google.com/uc?id=1Ms3Q6MYQrQUA_PKZbJ2t2NeYFQ5jloMh'\n",
" EXAMPLE_SPINE_DATA = 'https://drive.google.com/uc?id=1K1J2wmWxYUPY0NbylcV4Otv88EqCL4Ys'\n",
" MEDMNIST_DICT = {'OrganMNIST3D': 'https://zenodo.org/record/6496656/files/organmnist3d.npz?download=1',\t\n",
" 'NoduleMNIST3D': 'https://zenodo.org/record/6496656/files/nodulemnist3d.npz?download=1',\n",
" 'AdrenalMNIST3D': 'https://zenodo.org/record/6496656/files/adrenalmnist3d.npz?download=1',\t\n",
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1 change: 1 addition & 0 deletions nbs/10a_tutorial_beginner_video.ipynb
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Expand Up @@ -54,6 +54,7 @@
}
],
"source": [
"#| hide_input\n",
"display(HTML(\"\"\"\n",
"<iframe width=\"560\" height=\"315\" src=\"https://www.youtube.com/embed/rOdwfF8efDE?si=WBE02h2Dzssz93Cr\" frameborder=\"0\" allowfullscreen></iframe>\n",
"\"\"\"))"
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2 changes: 1 addition & 1 deletion settings.ini
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Expand Up @@ -5,7 +5,7 @@
### Python Library ###
lib_name = fastMONAI
min_python = 3.7
version = 0.3.9
version = 0.4.0
### OPTIONAL ###

requirements = fastai==2.7.12 monai==1.2.0 torchio==0.18.91 xlrd>=1.2.0 scikit-image==0.19.3 imagedata==2.1.3 huggingface-hub gdown gradio opencv-python
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