Finish splitting things up.

ME-ICA · Aug 8, 2022 · aab1cdf · aab1cdf
1 parent 64d47d9
commit aab1cdf
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Showing 4 changed files with 10 additions and 4 deletions.
diff --git a/docs/api.rst b/docs/api.rst
@@ -214,7 +214,12 @@ API
    :toctree: generated/
    :template: function.rst
 
-   tedana.bibtex.
+   tedana.bibtex.find_braces
+   tedana.bibtex.reduce_idx
+   tedana.bibtex.index_bibtex_identifiers
+   tedana.bibtex.find_citations
+   tedana.bibtex.reduce_references
+   tedana.bibtex.get_description_references
 
 
 .. _api_utils_ref:

diff --git a/tedana/bibtex.py b/tedana/bibtex.py
@@ -8,6 +8,8 @@
 import numpy as np
 import pandas as pd
 
+from tedana.utils import get_resource_path
+
 LGR = logging.getLogger("GENERAL")
 RepLGR = logging.getLogger("REPORT")
 

diff --git a/tedana/utils.py b/tedana/utils.py
@@ -3,11 +3,9 @@
 """
 import logging
 import os.path as op
-import re
 
 import nibabel as nib
 import numpy as np
-import pandas as pd
 from nilearn._utils import check_niimg
 from scipy import ndimage
 from sklearn.utils import check_array

diff --git a/tedana/workflows/tedana.py b/tedana/workflows/tedana.py
@@ -29,6 +29,7 @@
     selection,
     utils,
 )
+from tedana.bibtex import get_description_references
 from tedana.stats import computefeats2
 from tedana.workflows.parser_utils import check_tedpca_value, is_valid_file
 
@@ -837,7 +838,7 @@ def tedana_workflow(
         fo.write(report)
 
     # Collect BibTeX entries for cited papers
-    references = utils.get_description_references(report)
+    references = get_description_references(report)
 
     with open(bibtex_file, "w") as fo:
         fo.write(references)