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Excise all mentions of duecredit.
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tsalo committed Jul 28, 2022
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12 changes: 0 additions & 12 deletions docs/faq.rst
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Expand Up @@ -97,18 +97,6 @@ the v3.2 code, with the goal of revisiting it when ``tedana`` is more stable.
Anyone interested in using v3.2 may compile and install an earlier release (<=0.0.4) of ``tedana``.


*************************************************
[tedana] What is the warning about ``duecredit``?
*************************************************

``duecredit`` is a python package that is used, but not required by ``tedana``.
These warnings do not affect any of the processing within the ``tedana``.
To avoid this warning, you can install ``duecredit`` with ``pip install duecredit``.
For more information about ``duecredit`` and concerns about
the citation and visibility of software or methods, visit the `duecredit`_ GitHub repository.

.. _duecredit: https://github.com/duecredit/duecredit

.. _here: https://bitbucket.org/prantikk/me-ica/commits/906bd1f6db7041f88cd0efcac8a74074d673f4f5

.. _NeuroStars: https://neurostars.org
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15 changes: 4 additions & 11 deletions docs/index.rst
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Expand Up @@ -112,9 +112,9 @@ When using tedana, please include the following citations:
}
</script>
<p>
<span id="tedana_citation">tedana</span>
This link is for the most recent version of the code and that page has links to DOIs
for older versions. To support reproducibility, please cite the version you used:
<span id="tedana_citation">tedana</span>
This link is for the most recent version of the code and that page has links to DOIs
for older versions. To support reproducibility, please cite the version you used:
<a id="tedana_doi_url" href="https://doi.org/10.5281/zenodo.1250561">https://doi.org/10.5281/zenodo.1250561</a>
<img src onerror='fillCitation()' alt=""/>
</p>
Expand Down Expand Up @@ -143,19 +143,12 @@ When using tedana, please include the following citations:
<i>Proceedings of the National Academy of Sciences</i>, <i>110</i>, 16187-16192.
</p>

Alternatively, you can automatically compile relevant citations by running your
tedana code with `duecredit`_. For example, if you plan to run a script using
tedana (in this case, ``tedana_script.py``):

.. code-block:: bash
python -m duecredit tedana_script.py
Alternatively, you can use the text and citations produced by the tedana workflow.

You can also learn more about `why citing software is important`_.

.. _Differentiating BOLD and non-BOLD signals in fMRI time series using multi-echo EPI.: https://doi.org/10.1016/j.neuroimage.2011.12.028
.. _Integrated strategy for improving functional connectivity mapping using multiecho fMRI.: https://doi.org/10.1073/pnas.1301725110
.. _duecredit: https://github.com/duecredit/duecredit
.. _`why citing software is important`: https://www.software.ac.uk/how-cite-software


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3 changes: 0 additions & 3 deletions docs/installation.rst
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Expand Up @@ -13,9 +13,6 @@ packages will need to be installed:
- scipy
- mapca

You can also install several optional dependencies, notably ``duecredit``.
Please see the :doc:`FAQ <faq>` for more information on how tedana uses ``duecredit``.

After installing relevant dependencies, you can then install ``tedana`` with:

.. code-block:: bash
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