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Fix typos
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andersgs committed Jun 4, 2020
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## Authors

* Jason Kwong (@kwongjc) - GitHub: [kwongj](https://github.com/kwongj)
* Josh Zhang (@abcdtree) - GitHubL [abcdtree](https://github.com/abcdtree)
* Josh Zhang (@abcdtree) - GitHub: [abcdtree](https://github.com/abcdtree)
* Torsten Seemann (@torstenseemann) - GitHub: [tseemann](https://github.com/tseemann)

## Maintainers
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* Five columns for each of the genes with either:
- `FULL`: for a complete match to the gene in the database (as defined by the `--min_cov` and `--min_id` flags
which default to at least 95% coverage and percent id)
- `NONE`: with no match to the database
- `PARTIAL`: with there are matches that fall below the `--min_cov` and `--min_id` thresholds
- `NONE`: when there is no match to the database
- `PARTIAL`: where there are matches that fall below the `--min_cov` and `--min_id` thresholds
* COMMENTS: Which will try to explain a `Nontypeable` results. Current cases are:
- `No Prs found`: when there is no `FULL` match to the `Prs` gene is not likely to be a *Listeria monocytogenes*
- `Presence of all 5 genes, No a Known Serotype`: when all 5 genes are present
- `Presence of all 5 genes, not a known serotype`: when all 5 genes are present
- `No combination of fully matched genes resulted in a known serotype`: An unknown combination
- In addition, it will say `Unusual 4b with lmo0737` when reporting `4b, 4d, 4e*` serotype

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