Labor Berlin - Charité Vivantes GmbH
Pinned Loading
Repositories
- MultiQC Public Forked from MultiQC/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
LaborBerlin/MultiQC’s past year of commit activity - bedrock-claude-chat Public Forked from aws-samples/bedrock-claude-chat
AWS-native chatbot using Bedrock + Claude (+Mistral)
LaborBerlin/bedrock-claude-chat’s past year of commit activity - varvis-download Public
A CLI tool to download genomic analysis files from the Varvis API. Supports authentication, file type selection, proxy settings, and destination directory specification.
LaborBerlin/varvis-download’s past year of commit activity - ont-assembly-snake Public
Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.
LaborBerlin/ont-assembly-snake’s past year of commit activity - score-assemblies Public
Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).
LaborBerlin/score-assemblies’s past year of commit activity - chatgpt-mattermost-bot.fork Public Forked from yGuy/chatgpt-mattermost-bot
A very simple implementation of a service for a mattermost bot that uses ChatGPT in the backend.
LaborBerlin/chatgpt-mattermost-bot.fork’s past year of commit activity - bioconda-recipes Public Forked from bioconda/bioconda-recipes
Conda recipes for the bioconda channel.
LaborBerlin/bioconda-recipes’s past year of commit activity - LB-ncov2019-artic-nf Public Forked from connor-lab/ncov2019-artic-nf
A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019
LaborBerlin/LB-ncov2019-artic-nf’s past year of commit activity - TBProfiler Public Forked from jodyphelan/TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
LaborBerlin/TBProfiler’s past year of commit activity
