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Auxtel fit pt #100

Merged
merged 148 commits into from
Dec 5, 2022
Merged

Auxtel fit pt #100

merged 148 commits into from
Dec 5, 2022

Commits on Apr 4, 2022

  1. Merge pull request #95 from LSSTDESC/debug-auxtel 

    Debug auxtel

I still need to check if its work because following detailed instructions according github one by one failed. Just wait for my next comment.
    @sylvielsstfr
    sylvielsstfr authored Apr 4, 2022
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Commits on Apr 7, 2022

  1. Merge pull request #96 from LSSTDESC/debug-auxtel 

    refine the prior on DCCD for auxtel
    @jeremyneveu
    jeremyneveu authored Apr 7, 2022
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Commits on Jun 14, 2022

  1. add ratio order2/order1

    @sylvielsstfr
    sylvielsstfr committed Jun 14, 2022
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  2. add ratio order2/order1

    @sylvielsstfr
    sylvielsstfr committed Jun 14, 2022
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Commits on Jun 27, 2022

  1. change figure size to better see the plot in FullForwardModelFitWorks… 

    …pace.plot_fit()
    @sylvielsstfr
    sylvielsstfr committed Jun 27, 2022
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Commits on Jun 28, 2022

  1. bug in ftter:save_parameters_summary and change the size of figures i… 

    …n FFM
    @sylvielsstfr
    sylvielsstfr committed Jun 28, 2022
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  2. bug in ftter:save_parameters_summary and change the size of figures i… 

    …n FFM
    @sylvielsstfr
    sylvielsstfr committed Jun 28, 2022
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Commits on Jul 3, 2022

  1. ftit T and P in FFM

    Jérémy Neveu committed Jul 3, 2022
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Commits on Jul 9, 2022

  1. Solve 2 problems One for tools:rebin, one in image.find_target_init

    @sylvielsstfr
    sylvielsstfr committed Jul 9, 2022
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Commits on Jul 10, 2022

  1. correct sign for ronchi170lpmm dispersion axis angle

    Jérémy Neveu committed Jul 10, 2022
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  2. add debug info in extractor

    @sylvielsstfr
    sylvielsstfr committed Jul 10, 2022
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  3. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @sylvielsstfr
    sylvielsstfr committed Jul 10, 2022
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  4. add debug info in extractor

    @sylvielsstfr
    sylvielsstfr committed Jul 10, 2022
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Commits on Jul 11, 2022

  1. minor change

    @sylvielsstfr
    sylvielsstfr committed Jul 11, 2022
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Commits on Aug 22, 2022

  1. add fixed temperature

    Jérémy Neveu committed Aug 22, 2022
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Commits on Sep 12, 2022

  1. merge

    Jérémy Neveu committed Sep 12, 2022
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  2. add airmass fit for ADR

    Jérémy Neveu committed Sep 12, 2022
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  3. alternative ADR model from Sinclair 1985

    Jérémy Neveu committed Sep 12, 2022
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  4. store fitted airmass in header

    Jérémy Neveu committed Sep 12, 2022
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Commits on Oct 6, 2022

  1. optimization of parameters

    Jérémy Neveu committed Oct 6, 2022
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  2. change rotation angle

    Jérémy Neveu committed Oct 6, 2022
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  3. count outliers and masked pixels in chisq

    Jérémy Neveu committed Oct 6, 2022
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  4. use maks in buid_psf() for faster computation

    Jérémy Neveu committed Oct 6, 2022
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  5. MAJOR CHANGES: add independent PSF parameters for order 2; add y_c po… 

    …lynom for spectrogram trace to ADR model; better handling of the masks for faster computation; 3 loops to compute ADR
    Jérémy Neveu committed Oct 6, 2022
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Commits on Oct 7, 2022

  1. clean the code

    Jérémy Neveu committed Oct 7, 2022
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  2. Plot order 2 as a signal not a contamination

    Jérémy Neveu committed Oct 7, 2022
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  3. less verbosity

    @jeremyneveu
    jeremyneveu committed Oct 7, 2022
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  4. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Oct 7, 2022
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  5. debug order 2 lambdas

    Jérémy Neveu committed Oct 7, 2022
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  6. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Oct 7, 2022
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Commits on Oct 10, 2022

  1. MAJOR CHANGES: remove all self.lambdas_order2 because its misleading … 

    …: the wavelengths of the second order are the same as the ones of the first order
    Jérémy Neveu committed Oct 10, 2022
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  2. cleaning

    Jérémy Neveu committed Oct 10, 2022
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  3. add marker option for plot_spectrum_simple()

    Jérémy Neveu committed Oct 10, 2022
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  4. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit
    @jeremyneveu
    jeremyneveu committed Oct 10, 2022
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  5. clip plot_spectrum second order to max pixel visible

    Jérémy Neveu committed Oct 10, 2022
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Commits on Oct 12, 2022

  1. add ratio 3 over 2 for holo4_003

    Jérémy Neveu committed Oct 12, 2022
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  2. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Oct 12, 2022
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  3. debug setting of parameters.CCD_IMSIZE in load images procedures

    Jérémy Neveu committed Oct 12, 2022
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  4. NEW ratio 2/1 for holo4_003 from sky data using BG40 filter

    Jérémy Neveu committed Oct 12, 2022
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  5. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Oct 12, 2022
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  6. merge from master to get getCalspec

    @jeremyneveu
    jeremyneveu committed Oct 12, 2022
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  7. merge from master to get getCalspec

    @jeremyneveu
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Commits on Oct 13, 2022

  1. debug fit multispectra

    @jeremyneveu
    jeremyneveu committed Oct 13, 2022
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  2. add PSF_REG in output headers

    Jérémy Neveu committed Oct 13, 2022
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  3. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Oct 13, 2022
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  4. target label: replace . by space (for mu.col)

    Jérémy Neveu committed Oct 13, 2022
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Commits on Oct 17, 2022

  1. new strategy for libradtran simulation : do not write input and outpu… 

    …t files but use subprocess capabilities instead
    Jérémy Neveu committed Oct 17, 2022
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  2. repair target label (for eta dor)

    Jérémy Neveu committed Oct 17, 2022
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Commits on Oct 28, 2022

  1. less verbosity

    @jeremyneveu
    jeremyneveu committed Oct 28, 2022
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  2. add new Auxtel throughput built on 20220630 end of night

    @jeremyneveu
    jeremyneveu committed Oct 28, 2022
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  3. refactoring functions but buggy

    Jérémy Neveu committed Oct 28, 2022
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Commits on Nov 2, 2022

  1. update pressure, airmass and temperature in atmospheregrid() with spe… 

    …ctrum file name given
    Jérémy Neveu committed Nov 2, 2022
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  2. add filter label in output spectrum header

    Jérémy Neveu committed Nov 2, 2022
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  3. new arguments for atmosphere grid

    Jérémy Neveu committed Nov 2, 2022
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Commits on Nov 3, 2022

  1. PSF_REG default value closer to what is observed in auxtel data

    Jérémy Neveu committed Nov 3, 2022
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  2. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  3. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  4. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  5. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  6. Add camera_angle attribute to Spectrum

    Jérémy Neveu committed Nov 3, 2022
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  7. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  8. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  9. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  10. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  11. cleaning

    Jérémy Neveu committed Nov 3, 2022
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  12. Merge pull request #104 from LSSTDESC/auxtel_fit_PT_test 

    refactoring functions for simulator and fullfowardmodel
    @jeremyneveu
    jeremyneveu authored Nov 3, 2022
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  13. latest auxtel throughputs

    @jeremyneveu
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  14. latest auxtel throughputs

    @jeremyneveu
    jeremyneveu committed Nov 3, 2022
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  15. use lambdas_order2 for spectrogram simulation

    Jérémy Neveu committed Nov 3, 2022
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  16. new starting point for PWV

    Jérémy Neveu committed Nov 3, 2022
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  17. IMPORTANT: propagate model uncertainties to best fit parameters

    Jérémy Neveu committed Nov 3, 2022
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Commits on Nov 4, 2022

  1. DEBUG: official angle units are degrees, for ADR computation especially

    Jérémy Neveu committed Nov 4, 2022
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  2. remove np.object calls

    Jérémy Neveu committed Nov 4, 2022
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Commits on Nov 6, 2022

  1. enlarge a bit the mask with a convolution

    Jérémy Neveu committed Nov 6, 2022
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  2. DEBUG: preserve masked/zero-ed pixels in W matrix

    Jérémy Neveu committed Nov 6, 2022
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  3. add masking in spectrogram fit and simulation

    Jérémy Neveu committed Nov 6, 2022
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  4. propagate model uncertainties in plots

    Jérémy Neveu committed Nov 6, 2022
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  5. latest auxtel throughputs

    @jeremyneveu
    jeremyneveu committed Nov 6, 2022
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  6. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Nov 6, 2022
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  7. repair reset of lambda min and lambda max with filter

    Jérémy Neveu committed Nov 6, 2022
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  8. Merge branch 'auxtel_fit_PT' of github.com:LSSTDESC/Spectractor into … 

    …auxtel_fit_PT
    @jeremyneveu
    jeremyneveu committed Nov 6, 2022
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Commits on Nov 7, 2022

  1. latest auxtel throughputs

    @jeremyneveu
    jeremyneveu committed Nov 7, 2022
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Commits on Nov 9, 2022

  1. adjust tests for new spectractor exctraction

    Jérémy Neveu committed Nov 9, 2022
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Commits on Nov 10, 2022

  1. repair rescale_to_legendre() function

    Jérémy Neveu committed Nov 10, 2022
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  2. calibrate_spectrum: iterates for better computation of ADR

    Jérémy Neveu committed Nov 10, 2022
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  3. repair chromatic psf polynome degrees for tests and simulations

    Jérémy Neveu committed Nov 10, 2022
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  4. cleaning

    Jérémy Neveu committed Nov 10, 2022
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  5. repair full chain test after recent spectractor developments

    Jérémy Neveu committed Nov 10, 2022
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  6. backup tentative to propagte y_c best fit values to rotangle and dy0

    Jérémy Neveu committed Nov 10, 2022
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  7. fix lambda_ref to 550 by default, otherwise computed using reference … 

    …spectrum if it exists
    Jérémy Neveu committed Nov 10, 2022
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Commits on Nov 14, 2022

  1. remove verbosity

    Jérémy Neveu committed Nov 14, 2022
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  2. Fusion all outputs into one unique FITS file

    Jérémy Neveu committed Nov 14, 2022
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  3. move old ctio logbook data to tests/data

    Jérémy Neveu committed Nov 14, 2022
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  4. rename target label for getCalspec because of dots in names

    Jérémy Neveu committed Nov 14, 2022
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  5. upgrade spectractor version

    Jérémy Neveu committed Nov 14, 2022
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  6. upgrade spectractor version

    Jérémy Neveu committed Nov 14, 2022
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  7. merge tests branches

    Jérémy Neveu committed Nov 14, 2022
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  8. debug tests

    Jérémy Neveu committed Nov 14, 2022
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  9. cleaning

    Jérémy Neveu committed Nov 14, 2022
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  10. cleaning

    Jérémy Neveu committed Nov 14, 2022
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  11. increase coverage

    Jérémy Neveu committed Nov 14, 2022
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  12. remove fullchain

    Jérémy Neveu committed Nov 14, 2022
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  13. re-enable simulator tests

    Jérémy Neveu committed Nov 14, 2022
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  14. cleaning

    Jérémy Neveu committed Nov 14, 2022
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  15. re-enable test_simulator

    Jérémy Neveu committed Nov 14, 2022
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  16. re-enable test_simulator

    Jérémy Neveu committed Nov 14, 2022
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  17. increase coverage

    Jérémy Neveu committed Nov 14, 2022
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Commits on Nov 18, 2022

  1. repair docs

    Jérémy Neveu committed Nov 18, 2022
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  2. repair docs

    Jérémy Neveu committed Nov 18, 2022
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  3. repair docs

    Jérémy Neveu committed Nov 18, 2022
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  4. repair docs

    Jérémy Neveu committed Nov 18, 2022
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  5. repair docs

    Jérémy Neveu committed Nov 18, 2022
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Commits on Nov 19, 2022

  1. repair docs

    Jérémy Neveu committed Nov 19, 2022
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  2. repair docs

    Jérémy Neveu committed Nov 19, 2022
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  3. repair docs

    Jérémy Neveu committed Nov 19, 2022
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  4. repair docs

    Jérémy Neveu committed Nov 19, 2022
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  5. increase coverage

    Jérémy Neveu committed Nov 19, 2022
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Commits on Dec 3, 2022

  1. rewrite atmosphere classes to use rubin-libradtran conda package, res… 

    …huffle atmo parameters in wavelength order: aersols, ozone, pwv
    Jérémy Neveu committed Dec 3, 2022
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  2. adapt code to the new parametrization of atmosphere

    Jérémy Neveu committed Dec 3, 2022
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  3. reactivate atmosphere doc tests

    Jérémy Neveu committed Dec 3, 2022
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  4. update readme for libradtran

    Jérémy Neveu committed Dec 3, 2022
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  5. run tests only if astrometry.net is installed

    Jérémy Neveu committed Dec 3, 2022
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  6. repair doctests

    Jérémy Neveu committed Dec 3, 2022
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  7. repair doctests

    Jérémy Neveu committed Dec 3, 2022
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  8. rebuild getCalspec table at installatino

    Jérémy Neveu committed Dec 3, 2022
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  9. update version of getCalspec

    Jérémy Neveu committed Dec 3, 2022
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  10. update version of getCalspec

    Jérémy Neveu committed Dec 3, 2022
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  11. update version of getCalspec

    Jérémy Neveu committed Dec 3, 2022
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  12. remove noise in simu to remove randomness in the test

    Jérémy Neveu committed Dec 3, 2022
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  13. repair doctests

    Jérémy Neveu committed Dec 3, 2022
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  14. repair doctests

    Jérémy Neveu committed Dec 3, 2022
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  15. increase coverage

    Jérémy Neveu committed Dec 3, 2022
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  16. repair doctests

    Jérémy Neveu committed Dec 3, 2022
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  17. increase coverage

    Jérémy Neveu committed Dec 3, 2022
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Commits on Dec 4, 2022

  1. increase coverage

    Jérémy Neveu committed Dec 4, 2022
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  2. repair doctests

    Jérémy Neveu committed Dec 4, 2022
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  3. repair doctests

    Jérémy Neveu committed Dec 4, 2022
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  4. increase speedness of test_extractor with rebin=2

    Jérémy Neveu committed Dec 4, 2022
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  5. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  6. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  7. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  8. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  9. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  10. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  11. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  12. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  13. tentative to install astrometry.net

    Jérémy Neveu committed Dec 4, 2022
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  14. repaired astrometry

    Jérémy Neveu committed Dec 4, 2022
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