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Merge pull request #29 from KineticPreProcessor/dev
KPP version 2.4.0 release
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@@ -13,6 +13,7 @@ trigger: | |
- dev* | ||
- patch* | ||
- bugfix* | ||
- MECCA* | ||
pr: | ||
branches: | ||
include: | ||
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#!/bin/sh | ||
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######################################################################## | ||
### CI tests for github.com/KineticPreProcessor/KPP ### | ||
### NOTE: This script runs CI-tests manually (for testing/debugging) ### | ||
######################################################################## | ||
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# List of tests (add more as necessary; separate each with a space) | ||
all_tests="radau90 rk rktlm ros rosadj rosenbrock90 rostlm saprc2006 sd sdadj small_f90" | ||
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# Run each test | ||
# Check status of each individual operation and exit if any do not complete | ||
for this_test in $all_tests; do | ||
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cd ../ci-tests/$this_test | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Making clean for $this_test <<<<<<<<" | ||
echo "" | ||
make -f Makefile_$this_test distclean | ||
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# Also remove other output files from the tests | ||
rm -f *.m | ||
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cd .. | ||
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done | ||
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# Return w/ success | ||
exit 0 |
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#!/bin/sh | ||
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######################################################################## | ||
### CI tests for github.com/KineticPreProcessor/KPP ### | ||
### NOTE: This script runs CI-tests manually (for testing/debugging) ### | ||
######################################################################## | ||
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# List of tests (add more as necessary; separate each with a space) | ||
all_tests="radau90 rk rktlm ros rosadj rosenbrock90 rostlm saprc2006 sd sdadj small_f90" | ||
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# Run each test | ||
# Check status of each individual operation and exit if any do not complete | ||
for this_test in $all_tests; do | ||
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cd ../ci-tests/$this_test | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Generating $this_test mechanism with KPP <<<<<<<<" | ||
echo "" | ||
../../bin/kpp $this_test.kpp | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Building the $this_test test executable <<<<<<<<<" | ||
echo "" | ||
make -f Makefile_$this_test COMPILER=GFORTRAN | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Running the $this_test test <<<<<<<<" | ||
echo "" | ||
./$this_test.exe | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> $this_test test was successful! <<<<<<<<" | ||
echo "" | ||
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cd .. | ||
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done | ||
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# Return w/ success | ||
exit 0 |
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@@ -1,4 +1,42 @@ | ||
#!/bin/sh | ||
cd /kpp/examples | ||
../bin/kpp small_f90.kpp | ||
make -f Makefile_small_f90 | ||
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######################################################################## | ||
### CI tests for github.com/KineticPreProcessor/KPP ### | ||
######################################################################## | ||
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# List of tests (add more as necessary; separate each with a space) | ||
all_tests="radau90 rk rktlm ros rosadj rosenbrock90 rostlm saprc2006 sd sdadj small_f90" | ||
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# Run each test | ||
# Check status of each individual operation and exit if any do not complete | ||
for this_test in $all_tests; do | ||
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cd /kpp/ci-tests/$this_test | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Generating $this_test mechanism with KPP <<<<<<<<" | ||
echo "" | ||
../../bin/kpp $this_test.kpp | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Building the $this_test test executable <<<<<<<<<" | ||
echo "" | ||
make -f Makefile_$this_test COMPILER=GFORTRAN | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> Running the $this_test test <<<<<<<<" | ||
echo "" | ||
./$this_test.exe | ||
[ $? -ne 0 ] && exit 1 | ||
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echo "" | ||
echo ">>>>>>>> $this_test test was successful! <<<<<<<<" | ||
echo "" | ||
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done | ||
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# Return w/ success | ||
exit 0 |
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# OS generated files | ||
.DS_Store | ||
# https://www.atlassian.com/git/tutorials/saving-changes/gitignore | ||
# https://linuxize.com/post/gitignore-ignoring-files-in-git | ||
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# generated output files | ||
*.log | ||
# temporary files: | ||
*.~* | ||
*~ | ||
.\#* | ||
\#* | ||
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# files generated by bison: | ||
/src/lex.yy.c | ||
/src/y.tab.c | ||
/src/y.tab.h | ||
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# from compiler: | ||
*.mod | ||
*.o | ||
src/y.tab.h | ||
src/y.tab.c | ||
src/lex.yy.c | ||
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# executables | ||
bin/ | ||
# results from ci-tests: | ||
/ci-tests/**/*.m | ||
/ci-tests/**/*results* | ||
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# keep empty directory for executables, but not its contents: | ||
/bin/* | ||
!/bin/.gitkeep | ||
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# KPP-generated files: | ||
*_Function* | ||
*_Global* | ||
*_Hessian* | ||
*_HessianSP* | ||
*_Initialize* | ||
*_Integrator* | ||
*_Jacobian* | ||
*_JacobianSP* | ||
*_LinearAlgebra* | ||
*_Main* | ||
*.map | ||
*_mex_Fun* | ||
*_mex_Hessian* | ||
*_mex_Jac_SP* | ||
*_Model* | ||
*_Monitor* | ||
*_Parameters* | ||
*_Precision* | ||
*_Rates* | ||
*_Stoichiom* | ||
*_StoichiomSP* | ||
*_Util* | ||
Makefile_* | ||
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# LaTeX and BibTeX files: | ||
/manual/*.aux | ||
/manual/*.bbl | ||
/manual/*.blg | ||
/manual/*.log | ||
/manual/*.toc | ||
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# are there any *.dat files to exclude? | ||
*.dat |
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