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HiCUP-Plus v1.0.1
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@Kelly-ST-HRI Kelly-ST-HRI released this 31 Aug 07:19
· 136 commits to master since this release
v1.0.1
8ffb8a7

HiCUP+ v1.0.1 is a mnior update incorporating the changes described below:

  • implements built-in timing reported to stdout

  • bug fixes to post-processing in pairing step of hicup_mapper:
    ensures that reads are not sorted in intermeidiate SAM files
    and that reads are correctly paired in order. Index numbers
    are used for Bowtie, Bowtie2, and HiSAT2 in stream inputs.
    Matching strings in Dragen output is implemented without
    assuming FASTQ header format.

Full Changelog: v1.0.0...v1.0.1

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