Project setup based on https://github.com/I-TECH-UW/sedish-haiti.org/…

…tree/isanteplus-local

.dockerignore

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+# modified configs
+config_development.json

.env.local

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+# General
+CLUSTERED_MODE=false
+VERSION=v0.0.1
+
+# Log
+
+DEBUG=1
+BASHLOG_FILE=1
+BASHLOG_FILE_PATH=platform.log
+
+# Interoperability Layer - OpenHIM
+OPENHIM_CORE_INSTANCES=1
+OPENHIM_CONSOLE_INSTANCES=1
+OPENHIM_MEDIATOR_API_PORT=443
+MONGO_SET_COUNT=1
+OPENHIM_MONGO_URL=mongodb://mongo-1:27017/openhim
+OPENHIM_MONGO_ATNAURL=mongodb://mongo-1:27017/openhim
+
+# iSantePlus and MySQL
+MYSQL_ROOT_PASSWORD=change_for_prod!
+OMRS_CONFIG_CONNECTION_USERNAME_1=openmrs
+OMRS_CONFIG_CONNECTION_PASSWORD_1=change_for_prod!
+OMRS_CONFIG_CONNECTION_URL_1=jdbc:mysql://mysql:3306/openmrs?autoReconnect=true

.gitattributes

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+projects/isanteplus-db/initial-db/*.sql filter=lfs diff=lfs merge=lfs -text
+*.omod filter=lfs diff=lfs merge=lfs -text
+packages/database-mysql/config/initdb/*.sql filter=lfs diff=lfs merge=lfs -text

.github/workflows/main.yml

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+name: CI
+on:
+  push:
+    branches:
+    - main
+  pull_request:
+    branches:
+    - main
+  workflow_dispatch:
+
+jobs:
+  init-project:
+    timeout-minutes: 60
+    runs-on: ubuntu-latest
+
+    steps:
+      -
+        name: Checkout
+        uses: actions/checkout@v4
+
+      -
+        name: Set up Docker Buildx
+        uses: docker/setup-buildx-action@v3
+
+      - name: Initialize docker swarm
+        run: docker swarm init
+
+      - name: Build local docker image of HIE
+        run: ./build-custom-images.sh
+
+      - name: Download instant CLI
+        run: ./get-cli.sh linux latest
+
+      - name: Boot up HIE 
+        run: ./instant project init --env-file .env.hie
+
+      - name: Display container status
+        run: docker service ls
+
+      - name: Install Postman CLI
+        run: |
+          curl -o- "https://dl-cli.pstmn.io/install/linux64.sh" | sh
+      
+      # - name: Login to Postman CLI
+      #   run: postman login --with-api-key ${{ secrets.POSTMAN_API_KEY }}
+
+      # - name: Sleep for 250 seconds
+      #   run: sleep 250
+      #   shell: bash
+
+      - name: Stop containers
+        if: always()
+        run: ./instant project destroy

.gitignore

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+# Logs
+logs
+*.log
+npm-debug.log*
+yarn-debug.log*
+yarn-error.log*
+.yarn
+server/log
+
+# Runtime data
+pids
+*.pid
+*.seed
+*.pid.lock
+
+# Compiled binary addons (https://nodejs.org/api/addons.html)
+build/Release
+
+# Directory for instrumented libs generated by jscoverage/JSCover
+lib-cov
+
+# Coverage directories used by tools like istanbul and nyc
+coverage
+.nyc_output
+
+# Grunt intermediate storage (http://gruntjs.com/creating-plugins#storing-task-files)
+.grunt
+
+# Bower dependency directory (https://bower.io/)
+bower_components
+
+# node-waf configuration
+.lock-wscript
+
+# Dependency directories
+node_modules/
+jspm_packages/
+
+# TypeScript v1 declaration files
+typings/
+
+# Optional npm cache directory
+.npm
+
+# Optional eslint cache
+.eslintcache
+
+# Optional REPL history
+.node_repl_history
+
+# Output of 'npm pack'
+*.tgz
+
+# Yarn Integrity file
+.yarn-integrity
+
+# dotenv environment variables file
+.env
+configs/shr/.env
+configs/opencr-hapi/.env
+configs/opencr/.env
+configs/isanteplus/*.env
+
+# next.js build output
+.next
+
+# MacOS specific files
+.DS_Store
+*.DS_Store
+
+# Docker data volumes
+**/data
+!/projects/openhim-mediator-fhir-converter/data
+
+# Production
+/docs/build
+
+# Generated files
+/docs/.docusaurus
+/docs/.cache-loader
+
+# Built Go Binaries
+platform-linux
+platform.exe
+platform-macos
+instant-linux
+instant.exe
+instant-macos
+instant
+
+# Ignore the running script
+.mk.sh
+
+# Ignore OpenMRS modules + platform
+openmrs
+openmrs/*
+docker/isanteplus/openmrs-runtime.properties
+
+# VSCode
+.vscode
+
+# Config files
+config_docker.json
+tmpConfig.json
+
+# IPython notebook checkpoints
+*.ipynb_checkpoints
+/openmrs/
+*.ipynb_checkpoints/
+
+# Vagrant
+.vagrant
+
+# Server key/cert examples for ansible
+packaging/ansible/server_cert.pem
+packaging/ansible/server_key.pem
+server/certificates/server_cert.pem.bak
+server/certificates/server_key.pem.bak
+
+# Client key/cert examples for ansible
+ansible_key.pem
+ansible_cert.pem
+ansible_csr.pem
+ansible.p12
+
+# HAPI properties
+hapi.properties
+
+# Configs for isanteplus
+configs/isanteplus/custom_modules/*.omod
+configs/isanteplus/db/*.sql
+
+# Other
+*.bak
+parquet
+
+isante-backup
+
+dist
+
+.tmp

.postman/postman_env.ci.json

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+{
+	"id": "2432b862-e96d-4c54-8dd0-280091c4f4ad",
+	"name": "local",
+	"values": [
+		{
+			"key": "openhim-core-url",
+			"value": "https://openhim-core:8080",
+			"enabled": true
+		},
+		{
+			"key": "openhim-url",
+			"value": "https://openhim-core:5000",
+			"enabled": true
+		},
+		{
+			"key": "opencr-url",
+			"value": "http://opencr:3000",
+			"enabled": true
+		},
+		{
+			"key": "openhim-console-url",
+			"value": "http://openhim-console",
+			"enabled": true
+		},
+		{
+			"key": "isanteplus-url",
+			"value": "http://isanteplus:8080",
+			"enabled": true
+		}
+	],
+	"_postman_variable_scope": "environment",
+	"_postman_exported_at": "2021-12-08T04:56:15.104Z",
+	"_postman_exported_using": "Postman/9.3.1-211203-1700"
+}

.postman/run-tests.sh

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+#!/bin/bash
+
+docker-compose -f docker-compose.ports.yml up certgen
+
+docker-compose -f docker-compose.ports.yml up -d nginx openhim-core openhim-console mongo-db
+
+sleep 10
+
+docker-compose -f docker-compose.ports.yml up openhim-config
+
+docker-compose -f docker-compose.ports.yml up -d shr-fhir opencr-fhir opencr-es kafka zookeeper
+
+sleep 30
+
+docker-compose -f docker-compose.ports.yml up -d shr opencr
+
+sleep 30
+
+docker-compose -f docker-compose.ports.yml logs shr opencr
+
+collections=(
+  'https://www.getpostman.com/collections/46fd37386092a9f460e4'
+  'https://www.getpostman.com/collections/4d682cbb222bb538d365'
+  'https://www.getpostman.com/collections/4f2328a2ce056ff876e4'
+  'https://www.getpostman.com/collections/0d397620f00804b00d75'
+)
+
+for collection in ${collections[@]}; do
+  echo $collection
+  export POSTMAN_COLLECTION=$collection
+  docker-compose -f docker-compose.ports.yml up newman
+done

Dockerfile

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+ARG PLATFORM_VERSION=latest
+
+FROM jembi/platform:$PLATFORM_VERSION
+ADD . /implementation
+
+ADD ./utils /instant/utils
+
+RUN chmod +x /implementation/scripts/cmd/override-configs/override-configs
+RUN /implementation/scripts/cmd/override-configs/override-configs
+