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1. Genentech/pascient Genentech/pascient Public

   Jupyter Notebook 16 3

2. scEval scEval Public

   Codes for paper: Evaluating the Utilities of Large Language Models in Single-cell Data Analysis.

   Jupyter Notebook 71 11

3. MuSe-GNN MuSe-GNN Public

   [NeurIPS 2023] Official codes of "MuSe-GNN: Learning Unified Gene Representation From Multimodal Biological Graph Data"

   Python 30 1

4. Geneverse Geneverse Public

   [EMNLP 2024] This is the official code repo for the paper: Geneverse: A collection of Open-source Multimodal Large Language Models for Genomic and Proteomic Research.

   Python 8 4

5. ArcInstitute/evo2 ArcInstitute/evo2 Public

   Genome modeling and design across all domains of life

   Jupyter Notebook 3k 325

6. snap-stanford/Biomni snap-stanford/Biomni Public

   Biomni: a general-purpose biomedical AI agent

   Python 1.8k 232