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Bump large-image-source-vips from 1.17.2 to 1.30.6 #4447

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@dependabot dependabot bot commented on behalf of github Jan 13, 2025

Warning

Dependabot will stop supporting python v3.8!

Please upgrade to one of the following versions: v3.9, v3.10, v3.11, v3.12, or v3.13.

Bumps large-image-source-vips from 1.17.2 to 1.30.6.

Release notes

Sourced from large-image-source-vips's releases.

Version 1.30.6

Features

  • Allow gdal to read and rasterize vector formats (#1763)

Improvements

  • Harden the geojson annotation parser (#1743)
  • Add more color palettes (#1746)
  • Improve the list of extensions the bioformats source reports (#1748)
  • Improve handling of ome-tiff files generated by bioformats (#1750)
  • Read jp2k compressed associated images in tiff files (#1754)
  • Improve writing to zarr sinks from multiple processes (#1713)
  • Slightly faster GDAL validateCOG (#1761)
  • Improve clearing caches (#1766)
  • Harden many of the source reads (#1768)

Changes

Bug Fixes

  • Harden the tile cache between python versions and numpy versions (#1751)
  • Cast histogram ranges to floats (#1762)

Version 1.30.5

Improvements

  • When using the multisource to composite multiple images with alpha channels, use nearest neighbor for upper tiles (#1736)
  • Read magnification values from DICOM when reading them via bioformats (#1741)

Changes

  • Adjust how compositing is done on styled images by adjusting the expected full alpha value (#1735)

Version 1.30.4

Bug Fixes

  • Fix a bug handling pure uint8 data introduced in #1725 (#1734)

Version 1.30.3

Improvements

  • Format dates in item lists (#1707)

... (truncated)

Changelog

Sourced from large-image-source-vips's changelog.

1.30.6

Features

  • Allow gdal to read and rasterize vector formats (#1763)

Improvements

  • Harden the geojson annotation parser (#1743)
  • Add more color palettes (#1746)
  • Improve the list of extensions the bioformats source reports (#1748)
  • Improve handling of ome-tiff files generated by bioformats (#1750)
  • Read jp2k compressed associated images in tiff files (#1754)
  • Improve writing to zarr sinks from multiple processes (#1713)
  • Slightly faster GDAL validateCOG (#1761)
  • Improve clearing caches (#1766)
  • Harden many of the source reads (#1768)

Changes

Bug Fixes

  • Harden the tile cache between python versions and numpy versions (#1751)
  • Cast histogram ranges to floats (#1762)

1.30.5

Improvements

  • When using the multisource to composite multiple images with alpha channels, use nearest neighbor for upper tiles (#1736)
  • Read magnification values from DICOM when reading them via bioformats (#1741)

Changes

  • Adjust how compositing is done on styled images by adjusting the expected full alpha value (#1735)

1.30.4

Bug Fixes

  • Fix a bug handling pure uint8 data introduced in #1725 (#1734)

1.30.3

... (truncated)

Commits
  • e31d221 Merge pull request #1768 from girder/harden-readers
  • e556863 Merge pull request #1767 from girder/pin-zarr
  • b6b82c6 Harden reading a variety of test files
  • 105a5bb Pin zarr < 3
  • b819db4 Merge pull request #1766 from girder/clear-cache
  • de8b8cb When clearing all caches, better clear vips and gdal caches
  • 2e0f0b4 Merge pull request #1763 from girder/gdal-vector-formats
  • f0e2624 Merge pull request #1764 from girder/adjust-read-image
  • 1da43dc Update how some associated images are read in tiff files
  • f95a0de Allow gdal to read and rasterize vector formats
  • Additional commits viewable in compare view

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Bumps [large-image-source-vips](https://github.com/girder/large_image) from 1.17.2 to 1.30.6.
- [Release notes](https://github.com/girder/large_image/releases)
- [Changelog](https://github.com/girder/large_image/blob/master/CHANGELOG.md)
- [Commits](girder/large_image@v1.17.2...v1.30.6)

---
updated-dependencies:
- dependency-name: large-image-source-vips
  dependency-type: direct:production
  update-type: version-update:semver-minor
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added dependencies Pull requests that update a dependency file python Pull requests that update Python code labels Jan 13, 2025
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codecov bot commented Jan 13, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 98.46%. Comparing base (c0de8ff) to head (2e4666a).

Additional details and impacted files
@@           Coverage Diff           @@
##           master    #4447   +/-   ##
=======================================
  Coverage   98.46%   98.46%           
=======================================
  Files         268      268           
  Lines       21362    21362           
=======================================
  Hits        21035    21035           
  Misses        327      327           

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