omero server

clone install if you not have omero https://github.com/ome/docker-example-omero

bundle

The production bundle of the application.

1 Submodules

1.1 Init all submodules

git submodule update --init
git submodule foreach git checkout master

1.2 Update all submodules

git pull
git submodule foreach "git fetch && git reset --hard @{u}"

2 Add .evn.local

2.1 env.common

Go to microservices folder, copy .env.common file and paste with name .evn.common.local. In the file need to keep only the follow variables:

ARANGODB_PASSWORD=
REDIS_PASSWORD=
OMERO_HOST=
OMERO_WEB=

And set correct values for the variables. Also, you can override any other variables from .evn.common file.

2.2 env.local

In all microservices/ms-* folders need to create empty .env.local file. You can override any other variables from .evn file if you know what you do.

2.3 backend .env.local

Go to folder backend, copy .env file and paste with name .evn.local. In the file need to keep only the follow variables:

ARANGODB_PASSWORD=

JWT_SECRET_KEY=

# env for docker
ARANGO_ROOT_PASSWORD=${ARANGODB_PASSWORD}

And set correct values for the variables. Also, you can override any other variables from .evn file.

before run commands

I think you need to install docker on the server

and have access to omero server or install it locally

3 Commands of the application

To start the first time:

./app.sh build

To stop:

./app.sh stop

To start:

./app.sh start

to down (remove all docker containers of the application):

./app.sh down

to start after down:

./app.sh up

For more information run:

./app.sh usage