updated available motif sets #83

avantikalal · 2024-11-20T01:22:59Z

Added HOCOMOCO v12 motif set to grelu.resources.meme
Replaced the jvierstra consensus motif set based on JASPAR 2022 with updated consensus motifs based on JASPAR 2024
Added a get_jaspar function to directly load motifs from JASPAR db. Added pyjaspar as a dependency for this function.
Updated grelu.resources.get_meme_file_path to point to the new MEME files.
Re-ran all relevant tutorials to use the updated motif sets.

Addresses #70

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updated available motif sets

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avantikalal requested a review from suragnair November 20, 2024 01:23

pre-commit-ci bot and others added 4 commits November 20, 2024 01:23

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updated test

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Merge branch 'new-motifs' of https://github.com/Genentech/gReLU into …

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…new-motifs

added updated meme files

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suragnair approved these changes Nov 20, 2024

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avantikalal merged commit efd3081 into main Nov 20, 2024
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avantikalal deleted the new-motifs branch November 20, 2024 20:55

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