refactor: rename test_database_config.yaml to database_config.yaml in…

… exampleDataset

src/silo/config/database_config.test.cpp

@@ -80,8 +80,7 @@ INSTANTIATE_TEST_SUITE_P(
 TEST(DatabaseConfigReader, shouldReadConfigWithCorrectParameters) {
    DatabaseConfig config;
    ASSERT_NO_THROW(
-      config =
-         DatabaseConfigReader().readConfig("testBaseData/exampleDataset/test_database_config.yaml")
+      config = DatabaseConfigReader().readConfig("testBaseData/test_database_config.yaml")
    );
 
    ASSERT_EQ(config.schema.instance_name, "sars_cov-2_minimal_test_config");

src/silo/database.test.cpp

@@ -18,7 +18,7 @@ silo::Database buildTestDatabase() {
                     .mergeValuesFromOrDefault(silo::preprocessing::OptionalPreprocessingConfig());
 
    const auto database_config = silo::config::ConfigRepository().getValidatedConfig(
-      input_directory.directory + "test_database_config.yaml"
+      input_directory.directory + "database_config.yaml"
    );
 
    return silo::Database::preprocessing(config, database_config);

testBaseData/test_database_config.yaml

@@ -0,0 +1,29 @@
+schema:
+  instanceName: sars_cov-2_minimal_test_config
+  metadata:
+    - name: gisaid_epi_isl
+      type: string
+    - name: date
+      type: date
+    - name: unsorted_date
+      type: date
+    - name: region
+      type: string
+      generateIndex: true
+    - name: country
+      type: string
+      generateIndex: true
+    - name: pango_lineage
+      type: pango_lineage
+    - name: division
+      type: string
+      generateIndex: true
+    - name: age
+      type: int
+    - name: qc_value
+      type: float
+    - name: insertions
+      type: insertion
+  primaryKey: gisaid_epi_isl
+  dateToSortBy: date
+  partitionBy: pango_lineage