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GeneDR

This is a project about drug-disease link prediction for our paper under review.

Environment Requirement

  • pytorch == 1.8.1+cu111
  • numpy == 1.21.6
  • pandas == 1.3.4
  • networkx == 2.6.3

Installation

pip install -r requirements.txt

Data Download

  • Dataset 1
  • Dataset 2 (Datasets will be uploaded soon.)

Scripts Description

  • /model/ ** model.py **
  • dataset.py
  • utils.py
  • main.py

Example to Run

python main.py

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  • Python 91.2%
  • C++ 8.8%